RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 TISP43B9A030 160 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 H0YCG3 227 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 HNRNPDLO14979 420 aaKnown RBP12.88□□□□□ -0.35
LMCD1-206ENST00000456506 XPOTO43592 962 aaKnown RBP12.88□□□□□ -0.35
LMCD1-206ENST00000456506 FGF19O95750 216 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 SCP2P22307 547 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 PAX3P23760 479 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 MCM2P49736 904 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 LIG4P49917 911 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 CDR1P51861 262 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 GTF2BQ00403 316 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 ZRSR1Q15695 479 aaKnown RBP12.88□□□□□ -0.35
LMCD1-206ENST00000456506 SLC39A12Q504Y0 691 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 RILPL1Q5EBL4 403 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 PLA2G2CQ5R387 149 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 ARL6IP4Q66PJ3 421 aaKnown RBP12.88□□□□□ -0.35
LMCD1-206ENST00000456506 CRELD2Q6UXH1 353 aaPredicted RBP12.88□□□□□ -0.35
LMCD1-206ENST00000456506 ITIH5Q86UX2 942 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 CD302Q8IX05 232 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 GAB3Q8WWW8 586 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 IKZF4Q9H2S9 585 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 RPF1Q9H9Y2 349 aaKnown RBP12.88□□□□□ -0.35
LMCD1-206ENST00000456506 FBRSL1Q9HCM7 1045 aaKnown RBP12.88□□□□□ -0.35
LMCD1-206ENST00000456506 CCL26Q9Y258 94 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 DERAQ9Y315 318 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 STYXL1Q9Y6J8 313 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 ABCA7Q8IZY2 2146 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 EPN2O95208 641 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 F11P03951 625 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 HAPLN1P10915 354 aaPredicted RBP12.87□□□□□ -0.35
LMCD1-206ENST00000456506 PMLP29590 882 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 MATR3P43243 847 aaKnown RBP eCLIP12.87□□□□□ -0.35
LMCD1-206ENST00000456506 TUFMP49411 452 aaKnown RBP12.87□□□□□ -0.35
LMCD1-206ENST00000456506 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 GRIN1Q05586 938 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 SF3A2Q15428 464 aaKnown RBP12.87□□□□□ -0.35
LMCD1-206ENST00000456506 ITPRIPL2Q3MIP1 535 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 SCARA3Q6AZY7 606 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 EFCAB13Q8IY85 973 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 CMTM8Q8IZV2 173 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 EZH1Q92800 747 aaPredicted RBP12.87□□□□□ -0.35
LMCD1-206ENST00000456506 USP13Q92995 863 aaPredicted RBP12.87□□□□□ -0.35
LMCD1-206ENST00000456506 BICD1Q96G01 975 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 LOXL4Q96JB6 756 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 MSTO1Q9BUK6 570 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 TMLHEQ9NVH6 421 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 POLR3BQ9NW08 1133 aaPredicted RBP12.87□□□□□ -0.35
LMCD1-206ENST00000456506 C2CD2Q9Y426 696 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 ADAMTS9Q9P2N4 1935 aa12.87□□□□□ -0.35
LMCD1-206ENST00000456506 SPEGQ15772 3267 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 K7ENM7 598 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 TRDMT1O14717 391 aaKnown RBP12.86□□□□□ -0.35
LMCD1-206ENST00000456506 SLC26A4O43511 780 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 TRAK2O60296 914 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 FOXD2O60548 495 aaPredicted RBP12.86□□□□□ -0.35
LMCD1-206ENST00000456506 TADA3O75528 432 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 ZNF806P0C7X5 589 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 CDC25CP30307 473 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 NMT1P30419 496 aaKnown RBP12.86□□□□□ -0.35
LMCD1-206ENST00000456506 PXNP49023 591 aaPredicted RBP12.86□□□□□ -0.35
LMCD1-206ENST00000456506 ACOT2P49753 483 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 WNT7BP56706 349 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 NLRP12P59046 1061 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 TMEM132DQ14C87 1099 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 ST3GAL2Q16842 350 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 ZC2HC1CQ53FD0 456 aaPredicted RBP12.86□□□□□ -0.35
LMCD1-206ENST00000456506 ARHGAP15Q53QZ3 475 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 NAIF1Q69YI7 327 aaPredicted RBP12.86□□□□□ -0.35
LMCD1-206ENST00000456506 TRIM68Q6AZZ1 485 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 ARMCX5Q6P1M9 558 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 KBTBD6Q86V97 674 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 GPBP1Q86WP2 473 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 CXorf38Q8TB03 319 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 SPPL2BQ8TCT7 592 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 GIPC2Q8TF65 315 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 C2orf15Q8WU43 125 aaKnown RBP12.86□□□□□ -0.35
LMCD1-206ENST00000456506 ZC3H10Q96K80 434 aaKnown RBP12.86□□□□□ -0.35
LMCD1-206ENST00000456506 AK8Q96MA6 479 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 PKMYT1Q99640 499 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 SEPT5Q99719 369 aaPredicted RBP12.86□□□□□ -0.35
LMCD1-206ENST00000456506 STRA6Q9BX79 667 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 ARRDC1-AS1Q9H2J1 176 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 ST6GALNAC4Q9H4F1 302 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 ASB7Q9H672 318 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 PARVGQ9HBI0 331 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 GKN1Q9NS71 199 aa12.86□□□□□ -0.35
LMCD1-206ENST00000456506 AKAP13Q12802 2813 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 ZZEF1O43149 2961 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 DPYSL4O14531 572 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 CYB561D2O14569 222 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 AXIN1O15169 862 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 EIF5BO60841 1220 aaKnown RBP12.85□□□□□ -0.35
LMCD1-206ENST00000456506 PPP1R37O75864 691 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 AKAP3O75969 853 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 EGFP01133 1207 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 ADSSP30520 456 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 GPR15P49685 360 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 POU5F1Q01860 360 aaKnown RBP12.85□□□□□ -0.35
LMCD1-206ENST00000456506 RUNX3Q13761 415 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 MCM6Q14566 821 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms