RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 COPG1Q9Y678 874 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 SESN1Q9Y6P5 492 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 REREQ9P2R6 1566 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 USP17L15C9J2P7 530 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 USP17L13C9JLJ4 530 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 USP17L11C9JVI0 530 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 USP17L18D6R9N7 530 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 USP17L22D6RA61 530 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 USP17L17D6RBQ6 530 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 USP17L19D6RCP7 530 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 USP17L20D6RJB6 530 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 SNAP23O00161 211 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 CYTH3O43739 400 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 IDH3BO43837 385 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 ALOX15P16050 662 aaPredicted RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 FMO5P49326 533 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 USP17L24Q0WX57 530 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 ARMC4Q5T2S8 1044 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 USP17L6PQ6QN14 398 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 P3H2Q8IVL5 708 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 PHF21AQ96BD5 680 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 C6orf62Q9GZU0 229 aaPredicted RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 COPG2Q9UBF2 871 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 GGA1Q9UJY5 639 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 PRELID1Q9Y255 219 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 PDXKO00764 312 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 OATP04181 439 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 CASP5P51878 434 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 NR1H2P55055 460 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 SNAP25P60880 206 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 LACTB2Q53H82 288 aaPredicted RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 ZSCAN18Q8TBC5 510 aaPredicted RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 TCP10LQ8TDR4 215 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 NGLY1Q96IV0 654 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 WNK4Q96J92 1243 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 CHID1Q9BWS9 393 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 TRPC7Q9HCX4 862 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 SEC31BQ9NQW1 1179 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 RSL24D1Q9UHA3 163 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 FLT1P17948 1338 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 SEMA3DO95025 777 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 PROCP04070 461 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 SERPINB9P50453 376 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 MRPS22P82650 360 aaKnown RBP12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 LBRQ14739 615 aaKnown RBP12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 CHURC1Q8WUH1 139 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 PREBQ9HCU5 417 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 HMG20AQ9NP66 347 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 DIABLOQ9NR28 239 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 PICK1Q9NRD5 415 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 PARVAQ9NVD7 372 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 A0A087WXM4 84 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 RFX1P22670 979 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 SCARF1Q14162 830 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 PTK2BQ14289 1009 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 RNF43Q68DV7 783 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 ELMSAN1Q6PJG2 1045 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 C1orf131Q8NDD1 294 aaKnown RBP12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 FAM213AQ9BRX8 229 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 DHX36Q9H2U1 1008 aaKnown RBP12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 CLASP1Q7Z460 1538 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 AATKQ6ZMQ8 1374 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 CLOCKO15516 846 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 NFKBIAP25963 317 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 RCAN1P53805 252 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 LPIN1Q14693 890 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 PKN2Q16513 984 aaKnown RBP12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 FIGNQ5HY92 759 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 PDPK2PQ6A1A2 396 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 RIPOR1Q6ZS17 1223 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 CCDC117Q8IWD4 279 aaPredicted RBP12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 IQCKQ8N0W5 287 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 FBXO36Q8NEA4 188 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 TNIP2Q8NFZ5 429 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 ATP8B4Q8TF62 1192 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 NACA2Q9H009 215 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 SLC16A4O15374 487 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 LYNP07948 512 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 ALDH1A3P47895 512 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 CDK16Q00536 496 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 SLC45A4Q5BKX6 768 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 MREGQ8N565 214 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 RBM46Q8TBY0 533 aaKnown RBP12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 TMEM245Q9H330 911 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 BARHL2Q9NY43 387 aa12.87□□□□□ -0.35
NEDD4L-208ENST00000456173 TNFRSF21O75509 655 aa12.86□□□□□ -0.35
NEDD4L-208ENST00000456173 KCNA2P16389 499 aa12.86□□□□□ -0.35
NEDD4L-208ENST00000456173 CCT3P49368 545 aaKnown RBP12.86□□□□□ -0.35
NEDD4L-208ENST00000456173 AMPD2Q01433 879 aa12.86□□□□□ -0.35
NEDD4L-208ENST00000456173 CENPCQ03188 943 aa12.86□□□□□ -0.35
NEDD4L-208ENST00000456173 EPC2Q52LR7 807 aa12.86□□□□□ -0.35
NEDD4L-208ENST00000456173 SYTL1Q8IYJ3 562 aa12.86□□□□□ -0.35
NEDD4L-208ENST00000456173 UBASH3BQ8TF42 649 aa12.86□□□□□ -0.35
NEDD4L-208ENST00000456173 AGBL1Q96MI9 1066 aa12.86□□□□□ -0.35
NEDD4L-208ENST00000456173 DHX35Q9H5Z1 703 aaKnown RBP12.86□□□□□ -0.35
NEDD4L-208ENST00000456173 ADCY10Q96PN6 1610 aa12.86□□□□□ -0.35
NEDD4L-208ENST00000456173 RCCD1A6NED2 376 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms