RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 PROSCO94903 275 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 RAB6CQ53S08 254 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 ANKS1BQ7Z6G8 1248 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 EXOC8Q8IYI6 725 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 NETO2Q8NC67 525 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 WHAMMQ8TF30 809 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 TMEM40Q8WWA1 233 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 LRRC45Q96CN5 670 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 ELOVL4Q9GZR5 314 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 RAB6CQ9H0N0 254 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 PPANQ9NQ55 473 aaKnown RBP16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 TBK1Q9UHD2 729 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 MRPL42Q9Y6G3 142 aaKnown RBP16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 TRIP11Q15643 1979 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 ABLIM1O14639 778 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 RECQL4O94761 1208 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 MFSD7Q6UXD7 560 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 ANKRD23Q86SG2 305 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 RHOT1Q8IXI2 618 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 RPS6KC1Q96S38 1066 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 SEMA4AQ9H3S1 761 aa16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 TIMM13Q9Y5L4 95 aaPredicted RBP16.15■□□□□ 0.18
GTF2IRD1-203ENST00000455841 SHBGP04278 402 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MYZAPP0CAP1 466 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 ACAT1P24752 427 aaKnown RBP16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 NRLP54845 237 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 TAF5Q15542 800 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 ZSCAN26Q16670 478 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MARCH8Q5T0T0 291 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 SH3PXD2AQ5TCZ1 1133 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 ZFP42Q96MM3 310 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 ZMAT2Q96NC0 199 aaKnown RBP16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 CYTH4Q9UIA0 394 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 CETN2P41208 172 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 PTPN11Q06124 597 aaPredicted RBP16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 CUL1Q13616 776 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 GRB14Q14449 540 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MFSD10Q14728 455 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 SURF1Q15526 300 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 RAPGEF5Q92565 580 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MLXIPLQ9NP71 852 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MYADML2A6NDP7 307 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 CYP1A1P04798 512 aaPredicted RBP16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 HNRNPH2P55795 449 aaKnown RBP16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 IFRD2Q12894 506 aaPredicted RBP16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MAP2K5Q13163 448 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 HIC1Q14526 733 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 UAP1Q16222 522 aaPredicted RBP16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 C15orf59Q2T9L4 293 aaPredicted RBP16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MGARPQ8TDB4 240 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 PIWIL1Q96J94 861 aaKnown RBP16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 FAM114A2Q9NRY5 505 aa16.14■□□□□ 0.17
GTF2IRD1-203ENST00000455841 DCDC2CA8MYV0 355 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 PMM2O15305 246 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 CHRNA3P32297 505 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 TRIM32Q13049 653 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 WDTC1Q8N5D0 677 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 TRIM11Q96F44 468 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 B3GNT5Q9BYG0 378 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MTRF1LQ9UGC7 380 aaKnown RBP16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 PASKQ96RG2 1323 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 ZC3H4Q9UPT8 1303 aaKnown RBP16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MEIS3P2A8K0S8 358 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 A8MXQ7 604 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MEFVO15553 781 aaPredicted RBP16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 SLC29A2Q14542 456 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 PPP6R3Q5H9R7 873 aaPredicted RBP16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 SCUBE3Q8IX30 993 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 HASPINQ8TF76 798 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 LPPQ93052 612 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 C9orf72Q96LT7 481 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MRPL45Q9BRJ2 306 aaKnown RBP16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 UBXN6Q9BZV1 441 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 PTPRHQ9HD43 1115 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 INPP5FQ9Y2H2 1132 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 SCINQ9Y6U3 715 aa16.13■□□□□ 0.17
GTF2IRD1-203ENST00000455841 SGK1O00141 431 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MICAL2O94851 1124 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 ZBTB48P10074 688 aaPredicted RBP16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 MMP8P22894 467 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 ECHS1P30084 290 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 RAD23BP54727 409 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 CLDN10P78369 228 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 SMAD1Q15797 465 aaKnown RBP16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 DENND2CQ68D51 928 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 NDRG1Q92597 394 aaKnown RBP16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 FAM149B1Q96BN6 582 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 FAM81BQ96LP2 452 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 DDX23Q9BUQ8 820 aaKnown RBP16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 VIPAS39Q9H9C1 493 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 TSPAN16Q9UKR8 245 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 LCP1P13796 627 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 IGFBP6P24592 240 aaPredicted RBP16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 CRHR2Q13324 411 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 ZNF618Q5T7W0 954 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 ZC3H18Q86VM9 953 aaKnown RBP16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 ZNF677Q86XU0 584 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 TMEM176AQ96HP8 235 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 B4GALT4O60513 344 aa16.12■□□□□ 0.17
GTF2IRD1-203ENST00000455841 CD48P09326 243 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms