RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 NRIP1P48552 1158 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 CLCN5P51795 746 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 SP2Q02086 613 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 BTG3Q14201 252 aaPredicted RBP4.28□□□□□ -1.72
RBM39-220ENST00000455343 SLC9A5Q14940 896 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 CCDC96Q2M329 555 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 CELF3Q5SZQ8 465 aaKnown RBP4.28□□□□□ -1.72
RBM39-220ENST00000455343 ZFYVE27Q5T4F4 411 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 NT5DC1Q5TFE4 455 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 WWC2Q6AWC2 1192 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 MCTP2Q6DN12 878 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 SYCE2Q6PIF2 218 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 KCNV1Q6PIU1 500 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 RTN4RL1Q86UN2 441 aaPredicted RBP4.28□□□□□ -1.72
RBM39-220ENST00000455343 CPNE8Q86YQ8 564 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 UBALD2Q8IYN6 164 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 ZNF513Q8N8E2 541 aaPredicted RBP4.28□□□□□ -1.72
RBM39-220ENST00000455343 SMARCC2Q8TAQ2 1214 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 POF1BQ8WVV4 589 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 CPA5Q8WXQ8 436 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 TTC14Q96N46 770 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 RMDN3Q96TC7 470 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 NACAP1Q9BZK3 213 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 NAPBQ9H115 298 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 ZBTB40Q9NUA8 1239 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 SORCS3Q9UPU3 1222 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 MRVI1Q9Y6F6 885 aa4.28□□□□□ -1.72
RBM39-220ENST00000455343 MRPL42Q9Y6G3 142 aaKnown RBP4.28□□□□□ -1.72
RBM39-220ENST00000455343 MYO7AQ13402 2215 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 FRMPD2Q68DX3 1309 aaPredicted RBP4.27□□□□□ -1.73
RBM39-220ENST00000455343 NPHP3-ACAD11A0A0J9YXS1 232 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 FSD2A1L4K1 749 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 C7orf72A4D263 438 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 ANKRD34BA5PLL1 514 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 RANBP6O60518 1105 aaKnown RBP4.27□□□□□ -1.73
RBM39-220ENST00000455343 GGPS1O95749 300 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 LGALS2P05162 132 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 ARP10275 920 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 UBA1P22314 1058 aaKnown RBP4.27□□□□□ -1.73
RBM39-220ENST00000455343 NASPP49321 788 aaPredicted RBP4.27□□□□□ -1.73
RBM39-220ENST00000455343 HSD17B4P51659 736 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 RBM10P98175 930 aaKnown RBP4.27□□□□□ -1.73
RBM39-220ENST00000455343 PLP2Q04941 152 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 UBE3AQ05086 875 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 MGAT3Q09327 533 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 LPIN1Q14693 890 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 ALX1Q15699 326 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 PPP2R5EQ16537 467 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 DUSP6Q16828 381 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 SPATS1Q496A3 300 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 GPATCH4Q5T3I0 446 aaKnown RBP4.27□□□□□ -1.73
RBM39-220ENST00000455343 STOX1Q6ZVD7 989 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 RBM23Q86U06 439 aaKnown RBP4.27□□□□□ -1.73
RBM39-220ENST00000455343 MCF2L2Q86YR7 1114 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 CMTR2Q8IYT2 770 aaKnown RBP4.27□□□□□ -1.73
RBM39-220ENST00000455343 CARFQ8N187 725 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 KREMEN2Q8NCW0 462 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 SPATA33Q96N06 139 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 NOX5Q96PH1 765 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 CDCA3Q99618 268 aaPredicted RBP4.27□□□□□ -1.73
RBM39-220ENST00000455343 PDCD2LQ9BRP1 358 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 SEMA4AQ9H3S1 761 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 TLE6Q9H808 572 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 AGO3Q9H9G7 860 aaKnown RBP4.27□□□□□ -1.73
RBM39-220ENST00000455343 PXMP2Q9NR77 195 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 SETD4Q9NVD3 440 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.27□□□□□ -1.73
RBM39-220ENST00000455343 APEX2Q9UBZ4 518 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 AKT3Q9Y243 479 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.27□□□□□ -1.73
RBM39-220ENST00000455343 SQORQ9Y6N5 450 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 SIP14410 1827 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 CHD8Q9HCK8 2581 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 CACNA1BQ00975 2339 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 LCTP09848 1927 aa4.27□□□□□ -1.73
RBM39-220ENST00000455343 EP300Q09472 2414 aaPredicted RBP4.26□□□□□ -1.73
RBM39-220ENST00000455343 ABCB11O95342 1321 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 NRCAMQ92823 1304 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 MBLAC1A4D2B0 266 aaPredicted RBP4.26□□□□□ -1.73
RBM39-220ENST00000455343 PER2O15055 1255 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 PI15O43692 258 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 SMARCA5O60264 1052 aaPredicted RBP4.26□□□□□ -1.73
RBM39-220ENST00000455343 NOBOXO60393 691 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 NPHS1O60500 1241 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 HSPD1P10809 573 aaKnown RBP4.26□□□□□ -1.73
RBM39-220ENST00000455343 GHRP10912 638 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 GNAT1P11488 350 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 HOXB8P17481 243 aaPredicted RBP4.26□□□□□ -1.73
RBM39-220ENST00000455343 AOC1P19801 751 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 PUM1Q14671 1186 aaKnown RBP eCLIP4.26□□□□□ -1.73
RBM39-220ENST00000455343 CDC37Q16543 378 aaPredicted RBP4.26□□□□□ -1.73
RBM39-220ENST00000455343 USH1GQ495M9 461 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 FBXO47Q5MNV8 452 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 UBXN11Q5T124 520 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 ARHGEF16Q5VV41 709 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 MBLAC2Q68D91 279 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 KIAA1211LQ6NV74 962 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 ANKRD54Q6NXT1 300 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 TAF2Q6P1X5 1199 aa4.26□□□□□ -1.73
RBM39-220ENST00000455343 VHLLQ6RSH7 139 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms