RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 NAP1L1P55209 391 aaKnown RBP17.77■□□□□ 0.44
PDXDC1-204ENST00000455313 KANSL3Q9P2N6 904 aa17.77■□□□□ 0.44
PDXDC1-204ENST00000455313 LRFN2Q9ULH4 789 aa17.77■□□□□ 0.44
PDXDC1-204ENST00000455313 ALPK3Q96L96 1907 aa17.77■□□□□ 0.44
PDXDC1-204ENST00000455313 O00370 1275 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 ATMINO43313 823 aaPredicted RBP17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 VDRP11473 427 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 GATMP50440 423 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 RNASELQ05823 741 aaKnown RBP17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 SGO2Q562F6 1265 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 WSCD1Q658N2 575 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 ACOT1Q86TX2 421 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 C12orf29Q8N999 325 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 C1orf131Q8NDD1 294 aaKnown RBP17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 HASPINQ8TF76 798 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 ALS2CR12Q96Q35 445 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 DPEP3Q9H4B8 488 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 OSGEPQ9NPF4 335 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 PCDH10Q9P2E7 1040 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 GTF3C4Q9UKN8 822 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 STXBP5LQ9Y2K9 1186 aa17.77■□□□□ 0.43
PDXDC1-204ENST00000455313 FNDC1Q4ZHG4 1894 aaPredicted RBP17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 F8W810 466 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 DYNC1I1O14576 645 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 RAG1P15918 1043 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 WARSP23381 471 aaKnown RBP17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 LMO2P25791 158 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 GNL1P36915 607 aaPredicted RBP17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 GPC5P78333 572 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 IKBKEQ14164 716 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 TIGD5Q53EQ6 642 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 CD300LGQ6UXG3 332 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 MON1BQ7L1V2 547 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 OSTM1Q86WC4 334 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 SLC35G2Q8TBE7 412 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 TSC1Q92574 1164 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 ZNF653Q96CK0 615 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 SNX25Q9H3E2 840 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 KIAA1257Q9ULG3 409 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 PCDHGC5Q9Y5F6 944 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 LAMA2P24043 3122 aaKnown RBP17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 KIF4AO95239 1232 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 ITGB1P05556 798 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 CSF2RAP15509 400 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 CDH5P33151 784 aaPredicted RBP17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 NOP2P46087 812 aaKnown RBP17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 DENND1BQ6P3S1 775 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 DSTYKQ6XUX3 929 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 NPAS4Q8IUM7 802 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 COLGALT2Q8IYK4 626 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 MCOLN2Q8IZK6 566 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 TMEM35BQ8NCS4 154 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 CASD1Q96PB1 797 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 DNAJB4Q9UDY4 337 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 CHORDC1Q9UHD1 332 aaPredicted RBP17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 CEP83Q9Y592 693 aa17.76■□□□□ 0.43
PDXDC1-204ENST00000455313 CTAGE9A4FU28 777 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 I3L4J1 428 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 HOXA2O43364 376 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 PDGFRBP09619 1106 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 CNGA2Q16280 664 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 C2CD6Q53TS8 623 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 PHF13Q86YI8 300 aaPredicted RBP17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 RHOT2Q8IXI1 618 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 WDTC1Q8N5D0 677 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 NAPGQ99747 312 aaPredicted RBP17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 C11orf70Q9BRQ4 267 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 LHX5Q9H2C1 402 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 FAM49BQ9NUQ9 324 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 COG5Q9UP83 839 aa17.75■□□□□ 0.43
PDXDC1-204ENST00000455313 GRID2IPA4D2P6 1211 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 GABRDO14764 452 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 PALMO75781 387 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 MICAL2O94851 1124 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 BRCC3P46736 316 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 PPP1R2P3Q6NXS1 205 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 DCLRE1AQ6PJP8 1040 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 TMEM86AQ8N2M4 240 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 ZNF518BQ9C0D4 1074 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 TSPAN16Q9UKR8 245 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 TIMM13Q9Y5L4 95 aaPredicted RBP17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 M0QYV0 167 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 ENC1O14682 589 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 CTIFO43310 598 aaKnown RBP17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 CYP1A2P05177 515 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 FAM163BP0C2L3 166 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 MMP8P22894 467 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 IFI16Q16666 785 aaKnown RBP17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 PPP1R26Q5T8A7 1209 aaPredicted RBP17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 MFSD5Q6N075 450 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 LCLAT1Q6UWP7 414 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 MMS22LQ6ZRQ5 1243 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 CRYBG2Q8N1P7 616 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 TPCN2Q8NHX9 752 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 TRIM11Q96F44 468 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 FAM193BQ96PV7 902 aaPredicted RBP17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 LPIN3Q9BQK8 851 aa17.74■□□□□ 0.43
PDXDC1-204ENST00000455313 ADAM22Q9P0K1 906 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms