RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ACDQ96AP0 544 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 CDK5RAP3Q96JB5 506 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 SEPT5Q99719 369 aaPredicted RBP15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 ASB7Q9H672 318 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 C2orf42Q9NWW7 574 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 EBF1Q9UH73 591 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 KIF3AQ9Y496 699 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 PCDHB6Q9Y5E3 794 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 CFAP47Q6ZTR5 3102 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 TSC2P49815 1807 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 A0A0B4J269 797 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 ANO9A1A5B4 782 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 PIRO00625 290 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 RHOBTB1O94844 696 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 ATF6P18850 670 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 TOB1P50616 345 aaPredicted RBP15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 SLC12A3P55017 1021 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 BFSP1Q12934 665 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 MGAT5BQ3V5L5 792 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 SLC39A12Q504Y0 691 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 RILPL1Q5EBL4 403 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 C9orf57Q5W0N0 161 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 ARL6IP4Q66PJ3 421 aaKnown RBP15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 CC2D1AQ6P1N0 951 aaPredicted RBP15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 SYT13Q7L8C5 426 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 KCNK18Q7Z418 384 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 KBTBD6Q86V97 674 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 CCDC83Q8IWF9 413 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 OR10T2Q8NGX3 314 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 SLC46A2Q9BY10 475 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 HAPLN2Q9GZV7 340 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 GKN1Q9NS71 199 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 TDP1Q9NUW8 608 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 CPSF3Q9UKF6 684 aaKnown RBP15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 TBX20Q9UMR3 447 aa15.46■□□□□ 0.07
LYSMD3-202ENST00000453259 MYH11P35749 1972 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 PP2D1A8MPX8 630 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 KCNK5O95279 499 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 PROS1P07225 676 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 TNFSF9P41273 254 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 CYP4F8P98187 520 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 ATP2C1P98194 919 aaPredicted RBP15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 SPAG1Q07617 926 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 NBR1Q14596 966 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 TMEM132DQ14C87 1099 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 PLK5Q496M5 336 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 RNF43Q68DV7 783 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 FSTL4Q6MZW2 842 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 NT5DC4Q86YG4 428 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 DCP1BQ8IZD4 617 aaKnown RBP15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 TTC9BQ8N6N2 239 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 TTC8Q8TAM2 541 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 AK8Q96MA6 479 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 MSTO1Q9BUK6 570 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 HPS4Q9NQG7 708 aa15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 UXTQ9UBK9 157 aaPredicted RBP15.45■□□□□ 0.06
LYSMD3-202ENST00000453259 TMEM8BA6NDV4 472 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 APBB3O95704 486 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 PLA2G4BP0C869 781 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 CSH1P0DML2 217 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 CSH2P0DML3 217 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 HAPLN1P10915 354 aaPredicted RBP15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 TAF6P49848 677 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 ZNF131P52739 623 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 NLRP12P59046 1061 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 RAD51AP2Q09MP3 1159 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 IL17AQ16552 155 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 NFE2Q16621 373 aaPredicted RBP15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 DAB2IPQ5VWQ8 1189 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 JADE1Q6IE81 842 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 SLFN12LQ6IEE8 588 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 MON1AQ86VX9 555 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 CPA6Q8N4T0 437 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 LEO1Q8WVC0 666 aaPredicted RBP15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 MRPS31Q92665 395 aaKnown RBP15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 P2RY13Q9BPV8 354 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 LPIN3Q9BQK8 851 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 TMEM206Q9H813 350 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 PARVGQ9HBI0 331 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 ABCB6Q9NP58 842 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 CEP295Q9C0D2 2601 aa15.44■□□□□ 0.06
LYSMD3-202ENST00000453259 RNF40O75150 1001 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 SOAT2O75908 522 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 PNPLA4P41247 253 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 SV2CQ496J9 727 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 TMEM119Q4V9L6 283 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 SPATA18Q8TC71 538 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 USP13Q92995 863 aaPredicted RBP15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 ATP2A3Q93084 1043 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 TRMT2BQ96GJ1 504 aaKnown RBP15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 ZNF560Q96MR9 790 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 PNMA5Q96PV4 448 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 DUSP15Q9H1R2 295 aaPredicted RBP15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 EBF3Q9H4W6 596 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 PCDHB5Q9Y5E4 795 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 FAM208BQ5VWN6 2430 aa15.43■□□□□ 0.06
LYSMD3-202ENST00000453259 BCLAF3A2AJT9 711 aaKnown RBP15.42■□□□□ 0.06
LYSMD3-202ENST00000453259 K7ENM7 598 aa15.42■□□□□ 0.06
LYSMD3-202ENST00000453259 CYB561D2O14569 222 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms