RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 ZC3H3Q8IXZ2 948 aaKnown RBP16.61■□□□□ 0.25
VPS8-213ENST00000453056 ATAD1Q8NBU5 361 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 LEMD2Q8NC56 503 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 CCDC150Q8NCX0 1101 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 NELFBQ8WX92 580 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 TAF4BQ92750 862 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 ZNF512Q96ME7 567 aaPredicted RBP16.61■□□□□ 0.25
VPS8-213ENST00000453056 NUP62CLQ9H1M0 184 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 SNX25Q9H3E2 840 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 VRTNQ9H8Y1 702 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 ABI2Q9NYB9 513 aaPredicted RBP16.61■□□□□ 0.25
VPS8-213ENST00000453056 NXF1Q9UBU9 619 aaKnown RBP16.61■□□□□ 0.25
VPS8-213ENST00000453056 MUTYHQ9UIF7 546 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 CTNND2Q9UQB3 1225 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 PCDHB5Q9Y5E4 795 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 ZFP37Q9Y6Q3 630 aaPredicted RBP16.61■□□□□ 0.25
VPS8-213ENST00000453056 TRIM49BA6NDI0 452 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 TACC1O75410 805 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 CST3P01034 146 aaPredicted RBP16.6■□□□□ 0.25
VPS8-213ENST00000453056 RHOP08100 348 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 FAM163BP0C2L3 166 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 PTPN2P17706 415 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 VEPH1Q14D04 833 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 MGAT5BQ3V5L5 792 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 SCARA3Q6AZY7 606 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 LIMS2Q7Z4I7 341 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 EEF2KMTQ96G04 330 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 CEP63Q96MT8 703 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 SEPT5Q99719 369 aaPredicted RBP16.6■□□□□ 0.25
VPS8-213ENST00000453056 SYT15Q9BQS2 421 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 XYLT2Q9H1B5 865 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 ABCB6Q9NP58 842 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 AVENQ9NQS1 362 aaPredicted RBP16.6■□□□□ 0.25
VPS8-213ENST00000453056 ASAH2Q9NR71 780 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 EPS15L1Q9UBC2 864 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 ARMCX3Q9UH62 379 aaPredicted RBP16.6■□□□□ 0.25
VPS8-213ENST00000453056 CDH9Q9ULB4 789 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 MRPS23Q9Y3D9 190 aaKnown RBP16.6■□□□□ 0.25
VPS8-213ENST00000453056 ZDBF2Q9HCK1 2354 aa16.6■□□□□ 0.25
VPS8-213ENST00000453056 PI4K2BG5E9Z4 385 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 ZNF197O14709 1029 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 GABRDO14764 452 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 VNN2O95498 520 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 HLA-DRAP01903 254 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 CD44P16070 742 aaKnown RBP16.59■□□□□ 0.25
VPS8-213ENST00000453056 ACAT1P24752 427 aaKnown RBP16.59■□□□□ 0.25
VPS8-213ENST00000453056 GCLMP48507 274 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 MXI1P50539 228 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 PMS1P54277 932 aaKnown RBP16.59■□□□□ 0.25
VPS8-213ENST00000453056 NTHL1P78549 312 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 MAPRE1Q15691 268 aaKnown RBP16.59■□□□□ 0.25
VPS8-213ENST00000453056 SGSM1Q2NKQ1 1148 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 DCAF17Q5H9S7 520 aaPredicted RBP16.59■□□□□ 0.25
VPS8-213ENST00000453056 CYP4A22Q5TCH4 519 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 TCERG1LQ5VWI1 586 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 C4orf50Q6ZRC1 276 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 PDZD4Q76G19 769 aaPredicted RBP16.59■□□□□ 0.25
VPS8-213ENST00000453056 ITIH5Q86UX2 942 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 OSTM1Q86WC4 334 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 KBTBD7Q8WVZ9 684 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 CORO1BQ9BR76 489 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 C1QTNF1Q9BXJ1 281 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 MMRN2Q9H8L6 949 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 METTL14Q9HCE5 456 aaKnown RBP16.59■□□□□ 0.25
VPS8-213ENST00000453056 TMEM8AQ9HCN3 771 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 LMBRD1Q9NUN5 540 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 HCFC1R1Q9NWW0 138 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 DNMT3BQ9UBC3 853 aaKnown RBP16.59■□□□□ 0.25
VPS8-213ENST00000453056 CDH7Q9ULB5 785 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 ASB3Q9Y575 518 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 TECTAO75443 2155 aa16.59■□□□□ 0.25
VPS8-213ENST00000453056 PTPRDP23468 1912 aa16.58■□□□□ 0.25
VPS8-213ENST00000453056 MYH10P35580 1976 aa16.58■□□□□ 0.25
VPS8-213ENST00000453056 PPP1R3GB7ZBB8 358 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 VNN1O95497 513 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 FGFR1OPO95684 399 aaKnown RBP16.58■□□□□ 0.24
VPS8-213ENST00000453056 BMP6P22004 513 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 GNL1P36915 607 aaPredicted RBP16.58■□□□□ 0.24
VPS8-213ENST00000453056 MTMR3Q13615 1198 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 PTPN21Q16825 1174 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 CCDC40Q4G0X9 1142 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 C1orf220Q5T0J3 134 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 KRT39Q6A163 491 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 TTI2Q6NXR4 508 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 SCARA5Q6ZMJ2 495 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 SPATA2LQ8IUW3 424 aaPredicted RBP16.58■□□□□ 0.24
VPS8-213ENST00000453056 OR6B3Q8NGW1 331 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 FAM200AQ8TCP9 573 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 MYADMQ96S97 322 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 CRISPLD1Q9H336 500 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 IGSF9Q9P2J2 1179 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 LIMD1Q9UGP4 676 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 SLC27A5Q9Y2P5 690 aa16.58■□□□□ 0.24
VPS8-213ENST00000453056 FGF19O95750 216 aa16.57■□□□□ 0.24
VPS8-213ENST00000453056 ASS1P00966 412 aaKnown RBP16.57■□□□□ 0.24
VPS8-213ENST00000453056 HAPLN1P10915 354 aaPredicted RBP16.57■□□□□ 0.24
VPS8-213ENST00000453056 TRIM21P19474 475 aaKnown RBP16.57■□□□□ 0.24
VPS8-213ENST00000453056 NOP14P78316 857 aaKnown RBP16.57■□□□□ 0.24
VPS8-213ENST00000453056 PPP3CAQ08209 521 aa16.57■□□□□ 0.24
VPS8-213ENST00000453056 TAF12Q16514 161 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms