RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 CROTQ9UKG9 612 aa19.6■□□□□ 0.73
PTPA-223ENST00000452489 TRIM17Q9Y577 477 aa19.6■□□□□ 0.73
PTPA-223ENST00000452489 CICQ96RK0 1608 aaPredicted RBP19.6■□□□□ 0.73
PTPA-223ENST00000452489 POTECB2RU33 542 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 MATN2O00339 956 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 LDHAP00338 332 aaKnown RBP19.59■□□□□ 0.73
PTPA-223ENST00000452489 NR3C1P04150 777 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 CD48P09326 243 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 XIAPP98170 497 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 EFTUD2Q15029 972 aaKnown RBP eCLIP19.59■□□□□ 0.731e-6■■■□□ 15.7
PTPA-223ENST00000452489 DNAL1Q4LDG9 190 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 NSMFQ6X4W1 530 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 PASD1Q8IV76 773 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 THEMISQ8N1K5 641 aaPredicted RBP19.59■□□□□ 0.73
PTPA-223ENST00000452489 CNBD2Q96M20 576 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 INPP5FQ9Y2H2 1132 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 FUOMA2VDF0 154 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 CPA3P15088 417 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 BGNP21810 368 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 TFAP4Q01664 338 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 HSF5Q4G112 596 aaPredicted RBP19.59■□□□□ 0.73
PTPA-223ENST00000452489 ESCO1Q5FWF5 840 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 C6orf183Q5T699 404 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 KYAT3Q6YP21 454 aaKnown RBP19.59■□□□□ 0.73
PTPA-223ENST00000452489 PRPF39Q86UA1 669 aaKnown RBP19.59■□□□□ 0.73
PTPA-223ENST00000452489 REXO1Q8N1G1 1221 aaKnown RBP19.59■□□□□ 0.73
PTPA-223ENST00000452489 CCT7Q99832 543 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 MXD3Q9BW11 206 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 DCLK3Q9C098 648 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 PLGRKTQ9HBL7 147 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 TAGLN3Q9UI15 199 aa19.59■□□□□ 0.73
PTPA-223ENST00000452489 COL1A1P02452 1464 aaPredicted RBP19.59■□□□□ 0.73
PTPA-223ENST00000452489 A0A1B0GTW7 788 aa19.58■□□□□ 0.73
PTPA-223ENST00000452489 FOXN3O00409 490 aaPredicted RBP19.58■□□□□ 0.73
PTPA-223ENST00000452489 DNAJA2O60884 412 aa19.58■□□□□ 0.73
PTPA-223ENST00000452489 RAG1P15918 1043 aa19.58■□□□□ 0.73
PTPA-223ENST00000452489 TMED10P49755 219 aaKnown RBP19.58■□□□□ 0.73
PTPA-223ENST00000452489 MECOMQ03112 1051 aa19.58■□□□□ 0.73
PTPA-223ENST00000452489 PDIA2Q13087 525 aaKnown RBP19.58■□□□□ 0.73
PTPA-223ENST00000452489 CCDC124Q96CT7 223 aaKnown RBP19.58■□□□□ 0.73
PTPA-223ENST00000452489 BTBD9Q96Q07 612 aa19.58■□□□□ 0.73
PTPA-223ENST00000452489 GPCPD1Q9NPB8 672 aa19.58■□□□□ 0.73
PTPA-223ENST00000452489 SERPINB6P35237 376 aa19.58■□□□□ 0.72
PTPA-223ENST00000452489 SLC25A3Q00325 362 aa19.58■□□□□ 0.72
PTPA-223ENST00000452489 PRKD1Q15139 912 aaPredicted RBP19.58■□□□□ 0.72
PTPA-223ENST00000452489 CLPPQ16740 277 aaPredicted RBP19.58■□□□□ 0.72
PTPA-223ENST00000452489 FAM91A1Q658Y4 838 aa19.58■□□□□ 0.72
PTPA-223ENST00000452489 SYDE1Q6ZW31 735 aaPredicted RBP19.58■□□□□ 0.72
PTPA-223ENST00000452489 VPS50Q96JG6 964 aa19.58■□□□□ 0.72
PTPA-223ENST00000452489 BCAS3Q9H6U6 928 aa19.58■□□□□ 0.72
PTPA-223ENST00000452489 VAT1LQ9HCJ6 419 aa19.58■□□□□ 0.72
PTPA-223ENST00000452489 ZNHIT2Q9UHR6 403 aa19.58■□□□□ 0.72
PTPA-223ENST00000452489 BCS1LQ9Y276 419 aa19.58■□□□□ 0.72
PTPA-223ENST00000452489 COQ6Q9Y2Z9 468 aa19.58■□□□□ 0.72
PTPA-223ENST00000452489 RGPD5Q99666 1765 aa19.58■□□□□ 0.72
PTPA-223ENST00000452489 POTEB3A0JP26 581 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 USP17L3A6NCW0 530 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 USP17L4A6NCW7 530 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 C6orf222P0C671 652 aaPredicted RBP19.57■□□□□ 0.72
PTPA-223ENST00000452489 RBP3P10745 1247 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 GNA11P29992 359 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 EPHB1P54762 984 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 KCNA1Q09470 495 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 HIC1Q14526 733 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 POTEHQ6S545 545 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 POTEBQ6S5H4 581 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 USP17L1Q7RTZ2 530 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 NLRP10Q86W26 655 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 ERI1Q8IV48 349 aaKnown RBP19.57■□□□□ 0.72
PTPA-223ENST00000452489 ZCCHC9Q8N567 271 aaKnown RBP19.57■□□□□ 0.72
PTPA-223ENST00000452489 ZNF384Q8TF68 577 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 CASP10Q92851 521 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 COX4I2Q96KJ9 171 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 VPS11Q9H270 941 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 RRN3Q9NYV6 651 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 PSMC3IPQ9P2W1 217 aaPredicted RBP19.57■□□□□ 0.72
PTPA-223ENST00000452489 DTNAQ9Y4J8 743 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 ASTN1O14525 1302 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 ZBED1O96006 694 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 CLCN2P51788 898 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 TMEM214Q6NUQ4 689 aaKnown RBP19.57■□□□□ 0.72
PTPA-223ENST00000452489 AMIGO2Q86SJ2 522 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 ZNF564Q8TBZ8 553 aaPredicted RBP19.57■□□□□ 0.72
PTPA-223ENST00000452489 GRK7Q8WTQ7 553 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 NUP85Q9BW27 656 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 CRNKL1Q9BZJ0 848 aaKnown RBP19.57■□□□□ 0.72
PTPA-223ENST00000452489 TRPV5Q9NQA5 729 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 RSL24D1Q9UHA3 163 aaKnown RBP19.57■□□□□ 0.72
PTPA-223ENST00000452489 TBX22Q9Y458 520 aa19.57■□□□□ 0.72
PTPA-223ENST00000452489 GTPBP10A4D1E9 387 aaKnown RBP19.56■□□□□ 0.72
PTPA-223ENST00000452489 PRR5-ARHGAP8B1AHC4 643 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 DENRO43583 198 aaKnown RBP19.56■□□□□ 0.72
PTPA-223ENST00000452489 FOXD2O60548 495 aaPredicted RBP19.56■□□□□ 0.72
PTPA-223ENST00000452489 TGDSO95455 350 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 STIP1P31948 543 aaKnown RBP19.56■□□□□ 0.72
PTPA-223ENST00000452489 ACADVLP49748 655 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 ARHGAP8P85298 464 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 APOFQ13790 326 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 CBWD6Q4V339 395 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 SMUG1Q53HV7 270 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms