RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 XYLT2Q9H1B5 865 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 CDT1Q9H211 546 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 SMARCAD1Q9H4L7 1026 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 PTPRHQ9HD43 1115 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 GPR25O00155 361 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 ZNF286BP0CG31 522 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 INSRRP14616 1297 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 CD19P15391 556 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 PECAM1P16284 738 aaPredicted RBP12.77□□□□□ -0.36
COL27A1-202ENST00000451716 OSBPP22059 807 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 ASPAP45381 313 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 MBTD1Q05BQ5 628 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.36
COL27A1-202ENST00000451716 AGBL2Q5U5Z8 902 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 ARMCX2Q7L311 632 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 C3orf20Q8ND61 904 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 PPP1R13LQ8WUF5 828 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 CPB2Q96IY4 423 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 FZD8Q9H461 694 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 TMEM165Q9HC07 324 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 AAASQ9NRG9 546 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 IVNS1ABPQ9Y6Y0 642 aa12.77□□□□□ -0.36
COL27A1-202ENST00000451716 GOLGA8SH3BPF8 625 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 RIPK2O43353 540 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 VTNP04004 478 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 NFICP08651 508 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 NUDT17P0C025 328 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 ATF7P17544 494 aaPredicted RBP12.77□□□□□ -0.37
COL27A1-202ENST00000451716 PROZP22891 400 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 ADCY8P40145 1251 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 PSMC4P43686 418 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 KLF1Q13351 362 aaPredicted RBP12.77□□□□□ -0.37
COL27A1-202ENST00000451716 TTLL4Q14679 1199 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 WDR72Q3MJ13 1102 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 DCUN1D2Q6PH85 259 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 NLRP14Q86W24 1093 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 CCT8L2Q96SF2 557 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 PARP2Q9UGN5 583 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 SCINQ9Y6U3 715 aa12.77□□□□□ -0.37
COL27A1-202ENST00000451716 LRRC37A2A6NM11 1700 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 A0A087WZ62 844 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 ITGBL1O95965 494 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-202ENST00000451716 IVDP26440 423 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 PEX19P40855 299 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 LIG3P49916 1009 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 ITGA8P53708 1063 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 EIF3BP55884 814 aaKnown RBP12.76□□□□□ -0.37
COL27A1-202ENST00000451716 CCDC38Q502W7 563 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 DNAJC24Q6P3W2 148 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 GET4Q7L5D6 327 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-202ENST00000451716 ARFGAP2Q8N6H7 521 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 HAUS1Q96CS2 278 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 VCPIP1Q96JH7 1222 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 FDXACB1Q9BRP7 624 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-202ENST00000451716 C2orf40Q9H1Z8 148 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 IFT122Q9HBG6 1241 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 MGAMO43451 1857 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 TMEM191CA6NGB0 347 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 MEFVO15553 781 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-202ENST00000451716 PSTPIP1O43586 416 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 HBP1O60381 514 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 TNNC2P02585 160 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 EPHX2P34913 555 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 SF3A3Q12874 501 aaKnown RBP eCLIP12.76□□□□□ -0.371e-7■■■■■ 29.1
COL27A1-202ENST00000451716 DENND1BQ6P3S1 775 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 DPH6Q7L8W6 267 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 MYCBPAPQ8TBZ2 947 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 ZNF473Q8WTR7 871 aaKnown RBP12.76□□□□□ -0.37
COL27A1-202ENST00000451716 CDC42EP4Q9H3Q1 356 aaKnown RBP12.76□□□□□ -0.37
COL27A1-202ENST00000451716 HMGXB4Q9UGU5 601 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 SIX4Q9UIU6 781 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 FAM169AQ9Y6X4 670 aa12.76□□□□□ -0.37
COL27A1-202ENST00000451716 FOXO6A8MYZ6 492 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 C22orf31O95567 290 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 RARGP13631 454 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 RDXP35241 583 aaKnown RBP12.75□□□□□ -0.37
COL27A1-202ENST00000451716 AP3M2P53677 418 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 LACTBP83111 547 aaPredicted RBP12.75□□□□□ -0.37
COL27A1-202ENST00000451716 NFX1Q12986 1120 aaKnown RBP12.75□□□□□ -0.37
COL27A1-202ENST00000451716 TFDP1Q14186 410 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 LONRF1Q17RB8 773 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 MFSD7Q6UXD7 560 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 FASTKD5Q7L8L6 764 aaKnown RBP12.75□□□□□ -0.37
COL27A1-202ENST00000451716 HOOK3Q86VS8 718 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 KATNAL2Q8IYT4 538 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 GLIS1Q8NBF1 620 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 TMEM35BQ8NCS4 154 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 FBXO41Q8TF61 875 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 TLCD1Q96CP7 247 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 ANKRD36BP1Q96IX9 119 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 RUNDC3BQ96NL0 473 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 SCLT1Q96NL6 688 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 SELENOSQ9BQE4 189 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 RPF1Q9H9Y2 349 aaKnown RBP12.75□□□□□ -0.37
COL27A1-202ENST00000451716 CYTH4Q9UIA0 394 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 AKT3Q9Y243 479 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 A6NNZ2 444 aa12.75□□□□□ -0.37
COL27A1-202ENST00000451716 LACTBL1A8MY62 500 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms