RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 KIAA0895Q8NCT3 520 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 SHKBP1Q8TBC3 707 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 ATOH1Q92858 354 aaPredicted RBP10.41□□□□□ -0.74
USP54-207ENST00000451492 BORCS6Q96GS4 357 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 ZSWIM3Q96MP5 696 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 MMS19Q96T76 1030 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 PI4K2AQ9BTU6 479 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 FOXQ1Q9C009 403 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 INTS13Q9NVM9 706 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 DDX43Q9NXZ2 648 aaKnown RBP10.41□□□□□ -0.74
USP54-207ENST00000451492 GDE1Q9NZC3 331 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 WNT16Q9UBV4 365 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 HPSEQ9Y251 543 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 ARIH1Q9Y4X5 557 aaPredicted RBP10.41□□□□□ -0.74
USP54-207ENST00000451492 MYO15AQ9UKN7 3530 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 ANAPC1Q9H1A4 1944 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 USP34Q70CQ2 3546 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 NCANO14594 1321 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 VPS13AQ96RL7 3174 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 PVALEFA0A1B0GWK0 134 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 GALR2O43603 387 aaPredicted RBP10.4□□□□□ -0.74
USP54-207ENST00000451492 LRRN2O75325 713 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 MOSPD3O75425 235 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 RPN1P04843 607 aaKnown RBP10.4□□□□□ -0.74
USP54-207ENST00000451492 CD72P21854 359 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 PAX3P23760 479 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 FCARP24071 287 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 GABRR2P28476 465 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 VIPR2P41587 438 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 PSMC1P62191 440 aaKnown RBP10.4□□□□□ -0.74
USP54-207ENST00000451492 MYL7Q01449 175 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 MYO1EQ12965 1108 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 UBXN2BQ14CS0 331 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 SURF1Q15526 300 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 MLF2Q15773 248 aaPredicted RBP10.4□□□□□ -0.74
USP54-207ENST00000451492 KNOP1Q1ED39 458 aaKnown RBP10.4□□□□□ -0.74
USP54-207ENST00000451492 DUOXA2Q1HG44 320 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 SCARA5Q6ZMJ2 495 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 WDR49Q8IV35 697 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 DCP1BQ8IZD4 617 aaKnown RBP10.4□□□□□ -0.74
USP54-207ENST00000451492 CXorf38Q8TB03 319 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 ZSCAN18Q8TBC5 510 aaPredicted RBP10.4□□□□□ -0.74
USP54-207ENST00000451492 ELMO3Q96BJ8 720 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 HPDLQ96IR7 371 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 ASB16Q96NS5 453 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 CGRRF1Q99675 332 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 SCAND2PQ9GZW5 306 aaPredicted RBP10.4□□□□□ -0.74
USP54-207ENST00000451492 KCNH6Q9H252 994 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 ATXN3LQ9H3M9 355 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 ZFP14Q9HCL3 533 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 AVENQ9NQS1 362 aaPredicted RBP10.4□□□□□ -0.74
USP54-207ENST00000451492 HEBP1Q9NRV9 189 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 MAGED2Q9UNF1 606 aaPredicted RBP10.4□□□□□ -0.74
USP54-207ENST00000451492 MAPK8IP1Q9UQF2 711 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 PCDHB5Q9Y5E4 795 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 ZDBF2Q9HCK1 2354 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 DMDP11532 3685 aa10.4□□□□□ -0.74
USP54-207ENST00000451492 PHACTR2O75167 634 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 PRPF40AO75400 957 aaKnown RBP10.39□□□□□ -0.75
USP54-207ENST00000451492 ECI2O75521 394 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 CLCN5P51795 746 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 BIRC3Q13489 604 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 PSMD6Q15008 389 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 BMT2Q1RMZ1 405 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 SOWAHAQ2M3V2 549 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 INTS6LQ5JSJ4 861 aaKnown RBP10.39□□□□□ -0.75
USP54-207ENST00000451492 GPR158Q5T848 1215 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 CEP135Q66GS9 1140 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 VITQ6UXI7 678 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 TPRG1Q6ZUI0 275 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 TRAPPC11Q7Z392 1133 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 DNAJB7Q7Z6W7 309 aaPredicted RBP10.39□□□□□ -0.75
USP54-207ENST00000451492 ITIH5Q86UX2 942 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 TTC16Q8NEE8 873 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 SPPL2BQ8TCT7 592 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 PSMG2Q969U7 264 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 ELSPBP1Q96BH3 223 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 GCNAQ96QF7 691 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 PRRX2Q99811 253 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 BRD9Q9H8M2 597 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 KIAA1586Q9HCI6 787 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 SLC2A4RGQ9NR83 387 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 GTF3C4Q9UKN8 822 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 MAFFQ9ULX9 164 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 MUC6Q6W4X9 2439 aa10.39□□□□□ -0.75
USP54-207ENST00000451492 LRRIQ3A6PVS8 624 aaPredicted RBP10.38□□□□□ -0.75
USP54-207ENST00000451492 ATP2C2O75185 946 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 CST3P01034 146 aaPredicted RBP10.38□□□□□ -0.75
USP54-207ENST00000451492 PDGFRBP09619 1106 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 HAPLN1P10915 354 aaPredicted RBP10.38□□□□□ -0.75
USP54-207ENST00000451492 CYP2F1P24903 491 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 GDI1P31150 447 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 TUFMP49411 452 aaKnown RBP10.38□□□□□ -0.75
USP54-207ENST00000451492 MRE11P49959 708 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 EPHA5P54756 1037 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 TNNC1P63316 161 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 TRPC3Q13507 836 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 DDR2Q16832 855 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 SLC44A4Q53GD3 710 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 ARHGAP15Q53QZ3 475 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms