RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 MIF4GDA9UHW6 222 aaKnown RBP15.13■□□□□ 0.01
USP39-207ENST00000450066 O00370 1275 aa15.13■□□□□ 0.01
USP39-207ENST00000450066 HSPA6P17066 643 aa15.13■□□□□ 0.01
USP39-207ENST00000450066 MAMLD1Q13495 774 aa15.13■□□□□ 0.01
USP39-207ENST00000450066 STILQ15468 1287 aa15.13■□□□□ 0.01
USP39-207ENST00000450066 ERICH1Q86X53 443 aa15.13■□□□□ 0.01
USP39-207ENST00000450066 FAM126BQ8IXS8 530 aa15.13■□□□□ 0.01
USP39-207ENST00000450066 SELENOOQ9BVL4 669 aa15.13■□□□□ 0.01
USP39-207ENST00000450066 RSAD1Q9HA92 442 aa15.13■□□□□ 0.01
USP39-207ENST00000450066 ANAPC7Q9UJX3 599 aa15.13■□□□□ 0.01
USP39-207ENST00000450066 DDX3YO15523 660 aaKnown RBP15.12■□□□□ 0.01
USP39-207ENST00000450066 MYCP01106 439 aaPredicted RBP15.12■□□□□ 0.01
USP39-207ENST00000450066 SELPP16109 830 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 COMTP21964 271 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 AFF1P51825 1210 aaKnown RBP15.12■□□□□ 0.01
USP39-207ENST00000450066 LCLAT1Q6UWP7 414 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 DPH6Q7L8W6 267 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 TOP6BLQ8N6T0 577 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 NOA1Q8NC60 698 aaKnown RBP15.12■□□□□ 0.01
USP39-207ENST00000450066 APPL2Q8NEU8 664 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 KBTBD7Q8WVZ9 684 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 MS4A14Q96JA4 679 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 RGS18Q9NS28 235 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 MIOSQ9NXC5 875 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 TMEM110-MUSTN1A8MSY1 372 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 MYO1FO00160 1098 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 HUS1O60921 280 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 MICAL2O94851 1124 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 FAM163BP0C2L3 166 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 RPL9P32969 192 aaKnown RBP15.12■□□□□ 0.01
USP39-207ENST00000450066 SCNN1GP51170 649 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 BFSP2Q13515 415 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 LLGL2Q6P1M3 1020 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 LRRC8DQ7L1W4 858 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 ZNF598Q86UK7 904 aaKnown RBP15.12■□□□□ 0.01
USP39-207ENST00000450066 ECHDC2Q86YB7 292 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 RNF169Q8NCN4 708 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 SPATA4Q8NEY3 305 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 OR6B3Q8NGW1 331 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 ACTRT1Q8TDG2 376 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 BTBD6Q96KE9 485 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 WNT8AQ9H1J5 351 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 STRIP2Q9ULQ0 834 aa15.12■□□□□ 0.01
USP39-207ENST00000450066 GNL1P36915 607 aaPredicted RBP15.11■□□□□ 0.01
USP39-207ENST00000450066 GPD2P43304 727 aa15.11■□□□□ 0.01
USP39-207ENST00000450066 PHLDB2Q86SQ0 1253 aa15.11■□□□□ 0.01
USP39-207ENST00000450066 UBL4BQ8N7F7 174 aa15.11■□□□□ 0.01
USP39-207ENST00000450066 CD101Q93033 1021 aa15.11■□□□□ 0.01
USP39-207ENST00000450066 DNAI2Q9GZS0 605 aa15.11■□□□□ 0.01
USP39-207ENST00000450066 CARD9Q9H257 536 aa15.11■□□□□ 0.01
USP39-207ENST00000450066 EHD2Q9NZN4 543 aa15.11■□□□□ 0.01
USP39-207ENST00000450066 CYTH4Q9UIA0 394 aa15.11■□□□□ 0.01
USP39-207ENST00000450066 L1RE1Q9UN81 338 aa15.11■□□□□ 0.01
USP39-207ENST00000450066 NME7Q9Y5B8 376 aa15.11■□□□□ 0.01
USP39-207ENST00000450066 TCRBV5S1A1TA0A578 114 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 A8MXQ7 604 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 M0QYV0 167 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 EOMESO95936 686 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 SLC1A1P43005 524 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 SLC24A5Q71RS6 500 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 ACOT1Q86TX2 421 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 RTN4RL1Q86UN2 441 aaPredicted RBP15.1■□□□□ 0.01
USP39-207ENST00000450066 CRYBG2Q8N1P7 616 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 RASGEF1CQ8N431 466 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 C12orf29Q8N999 325 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 MSANTD4Q8NCY6 345 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 FTHL17Q9BXU8 183 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 SNX25Q9H3E2 840 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 SMARCAL1Q9NZC9 954 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 C9IYK1 514 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 PITPNM1O00562 1244 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 PODXLO00592 558 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 INPPL1O15357 1258 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 SPOPO43791 374 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 CEP104O60308 925 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 FGFR1P11362 822 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 WARSP23381 471 aaKnown RBP15.1■□□□□ 0.01
USP39-207ENST00000450066 CLCNKBP51801 687 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 FAM189BP81408 668 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 TAP1Q03518 808 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 PTPN20Q4JDL3 420 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 FAM43BQ6ZT52 329 aaPredicted RBP15.1■□□□□ 0.01
USP39-207ENST00000450066 MMGT1Q8N4V1 131 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 C3orf20Q8ND61 904 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 FEZF2Q8TBJ5 459 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 TRIM7Q9C029 511 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 LCMT1Q9UIC8 334 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 TSPAN16Q9UKR8 245 aa15.1■□□□□ 0.01
USP39-207ENST00000450066 TTC7AQ9ULT0 858 aaPredicted RBP15.1■□□□□ 0.01
USP39-207ENST00000450066 CCDC66A2RUB6 948 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 TMEM191CA6NGB0 347 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 PGRMC1O00264 195 aaKnown RBP15.09■□□□□ 0.01
USP39-207ENST00000450066 PROSCO94903 275 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 CTNNA2P26232 953 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 CTNNA1P35221 906 aaKnown RBP15.09■□□□□ 0.01
USP39-207ENST00000450066 PEX5P50542 639 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 GSCP56915 257 aaPredicted RBP15.09■□□□□ 0.01
USP39-207ENST00000450066 C2orf54Q08AI8 447 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 GRIK3Q13003 919 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 UPP1Q16831 310 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms