RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 CALCAP01258 141 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 AMHP03971 560 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 MMEP08473 750 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CHRNB2P17787 502 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 AARSP49588 968 aaKnown RBP eCLIP13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 KCNQ1P51787 676 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 VAV2P52735 878 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 WDR5P61964 334 aaKnown RBP13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 FMO1Q01740 532 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 RNASELQ05823 741 aaKnown RBP13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 KIAA1328Q86T90 577 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ALYREFQ86V81 257 aaKnown RBP13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 COLGALT2Q8IYK4 626 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ADGRF2Q8IZF7 708 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TOP6BLQ8N6T0 577 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 APPL2Q8NEU8 664 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 WHAMMQ8TF30 809 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 KBTBD7Q8WVZ9 684 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 DDX1Q92499 740 aaKnown RBP13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TWNKQ96RR1 684 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 MRPL45Q9BRJ2 306 aaKnown RBP13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 MTIF3Q9H2K0 278 aaKnown RBP13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 NKX2-4Q9H2Z4 354 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 LUC7LQ9NQ29 371 aaKnown RBP13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SEPT11Q9NVA2 429 aaKnown RBP13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TRMT1Q9NXH9 659 aaKnown RBP13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ADAMTS1Q9UHI8 967 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PTPRDP23468 1912 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TBKBP1A7MCY6 615 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TMEM189-UBE2V1I3L0A0 370 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 THAP12O43422 761 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ZNF500O60304 480 aaPredicted RBP13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 HUS1O60921 280 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 DDHD2O94830 711 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PAEPP09466 180 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ACRP10323 421 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ODC1P11926 461 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TNFAIP3P21580 790 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PAX3P23760 479 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 BRD2P25440 801 aaKnown RBP13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 NDST1P52848 882 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 RAD23BP54727 409 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 DEFB103AP81534 67 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CYP27A1Q02318 531 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ORC1Q13415 861 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SOWAHAQ2M3V2 549 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ZNF394Q53GI3 561 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 LIMS2Q7Z4I7 341 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PALB2Q86YC2 1186 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ZNF280BQ86YH2 543 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 REXO1L1PQ8IX06 675 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SLC4A11Q8NBS3 891 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SLC30A5Q8TAD4 765 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 FAM193BQ96PV7 902 aaPredicted RBP13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ELOVL4Q9GZR5 314 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 NAGPAQ9UK23 515 aa13.54□□□□□ -0.24
HLA-DRB9-201ENST00000449413 GBF1Q92538 1859 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 A0A0U1RQJ8 604 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CYB561D2O14569 222 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 WARSP23381 471 aaKnown RBP13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 IGFBP6P24592 240 aaPredicted RBP13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PAN2Q504Q3 1202 aaKnown RBP13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ALKBH5Q6P6C2 394 aaKnown RBP13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 DPH6Q7L8W6 267 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 UNC93AQ86WB7 457 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TXLNBQ8N3L3 684 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PDCL2Q8N4E4 241 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 HASPINQ8TF76 798 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ATRIPQ8WXE1 791 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 RABGGTAQ92696 567 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TMEM176AQ96HP8 235 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SENP8Q96LD8 212 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 NT5C1AQ9BXI3 368 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 RC3H2Q9HBD1 1191 aaKnown RBP13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 C11orf16Q9NQ32 467 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 HCSTQ9UBK5 93 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 DNAJB4Q9UDY4 337 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PUF60Q9UHX1 559 aaKnown RBP13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 YBX2Q9Y2T7 364 aaKnown RBP13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 NME7Q9Y5B8 376 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PCDHA13Q9Y5I0 950 aa13.53□□□□□ -0.24
HLA-DRB9-201ENST00000449413 F8W810 466 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 B3GAT3O94766 335 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 UPP2O95045 317 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 ITGB1P05556 798 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 CD19P15391 556 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 POU3F3P20264 500 aaPredicted RBP13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 MAGEA1P43355 309 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 BRCC3P46736 316 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 OR1G1P47890 313 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 SKIV2LQ15477 1246 aaKnown RBP13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 CLEC16AQ2KHT3 1053 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 ARHGAP29Q52LW3 1261 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 CCDC122Q5T0U0 273 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 C10orf76Q5T2E6 689 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 DCLRE1AQ6PJP8 1040 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 DSTYKQ6XUX3 929 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TRIM72Q6ZMU5 477 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms