RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 RAD9BQ6WBX8 426 aa15.58■□□□□ 0.08
TNF-208ENST00000449264 VPS36Q86VN1 386 aa15.58■□□□□ 0.08
TNF-208ENST00000449264 UNC93AQ86WB7 457 aa15.58■□□□□ 0.08
TNF-208ENST00000449264 SLC39A11Q8N1S5 342 aa15.58■□□□□ 0.08
TNF-208ENST00000449264 SP7Q8TDD2 431 aaPredicted RBP15.58■□□□□ 0.08
TNF-208ENST00000449264 HEXIM2Q96MH2 286 aaKnown RBP15.58■□□□□ 0.08
TNF-208ENST00000449264 AAASQ9NRG9 546 aa15.58■□□□□ 0.08
TNF-208ENST00000449264 SPTLC3Q9NUV7 552 aa15.58■□□□□ 0.08
TNF-208ENST00000449264 SSU72P8A0A1W2PR75 194 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 CYP11A1P05108 521 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 MMEP08473 750 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 PAEPP09466 180 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 TYMPP19971 482 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 LHX1P48742 406 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 KIF11P52732 1056 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 ELAVL2Q12926 359 aaKnown RBP15.57■□□□□ 0.08
TNF-208ENST00000449264 GLYCTKQ8IVS8 523 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 C12orf29Q8N999 325 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 AGPAT1Q99943 283 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 PDCL3Q9H2J4 239 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 FAM49BQ9NUQ9 324 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 SPG21Q9NZD8 308 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 PCDHB12Q9Y5F1 795 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 PLXNA4Q9HCM2 1894 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 GABRDO14764 452 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 SYN3O14994 580 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 TNFAIP3P21580 790 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 CYLC1P35663 651 aaPredicted RBP15.57■□□□□ 0.08
TNF-208ENST00000449264 PPM1AP35813 382 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 CDR1P51861 262 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 CDR2Q01850 454 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
TNF-208ENST00000449264 CCDC142Q17RM4 750 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 SGO2Q562F6 1265 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 VARS2Q5ST30 1063 aaKnown RBP15.57■□□□□ 0.08
TNF-208ENST00000449264 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.57■□□□□ 0.08
TNF-208ENST00000449264 PASD1Q8IV76 773 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 LNX1Q8TBB1 728 aaPredicted RBP15.57■□□□□ 0.08
TNF-208ENST00000449264 TFAP2BQ92481 460 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 TNIP3Q96KP6 325 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 LPIN3Q9BQK8 851 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 SYT15Q9BQS2 421 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 DESI2Q9BSY9 194 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 VN1R3Q9BXE9 311 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 DNAI2Q9GZS0 605 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 ADAMTS1Q9UHI8 967 aa15.57■□□□□ 0.08
TNF-208ENST00000449264 ATP2C2O75185 946 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 LINC00271P0C7V0 271 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 CHRNB2P17787 502 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 PCSK1P29120 753 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 CTNNB1P35222 781 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 FMO1Q01740 532 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 GFPT1Q06210 699 aaPredicted RBP15.56■□□□□ 0.08
TNF-208ENST00000449264 RTP2Q5QGT7 225 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 TOGARAM2Q6ZUX3 1019 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 TAS1R1Q7RTX1 841 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 CCDC170Q8IYT3 715 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 THEM5Q8N1Q8 247 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 B3GALNT2Q8NCR0 500 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 SPATA18Q8TC71 538 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 ZNF606Q8WXB4 792 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 DDX1Q92499 740 aaKnown RBP15.56■□□□□ 0.08
TNF-208ENST00000449264 CLP1Q92989 425 aaKnown RBP15.56■□□□□ 0.08
TNF-208ENST00000449264 RTP3Q9BQQ7 232 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 ZSWIM1Q9BR11 485 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 SYT11Q9BT88 431 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 MTUS1Q9ULD2 1270 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 PYCARDQ9ULZ3 195 aa15.56■□□□□ 0.08
TNF-208ENST00000449264 A0A087X0T9 212 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 LINC01553A4QN01 128 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 CARNS1A5YM72 827 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 NDUFA10O95299 355 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 CA3P07451 260 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 CFHP08603 1231 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 FAM163BP0C2L3 166 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 FAM228BP0C875 321 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 VDRP11473 427 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 CCDC130P13994 396 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 FGFR3P22607 806 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 BMS1Q14692 1282 aaKnown RBP15.55■□□□□ 0.08
TNF-208ENST00000449264 HS1BP3Q53T59 392 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 MDH1BQ5I0G3 518 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 KIAA0319Q5VV43 1072 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 ZNF280DQ6N043 979 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 ZNF677Q86XU0 584 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 PALB2Q86YC2 1186 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 ACRBPQ8NEB7 543 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 OR10T2Q8NGX3 314 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 OLIG1Q8TAK6 271 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 TTPALQ9BTX7 342 aa15.55■□□□□ 0.08
TNF-208ENST00000449264 EPN1Q9Y6I3 576 aaPredicted RBP15.55■□□□□ 0.08
TNF-208ENST00000449264 TMCO5BA8MYB1 307 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 DDX3XO00571 662 aaKnown RBP eCLIP15.54■□□□□ 0.08
TNF-208ENST00000449264 MED7O43513 233 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 FGF18O76093 207 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 ARHGEF15O94989 841 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 IPO7O95373 1038 aaKnown RBP15.54■□□□□ 0.08
TNF-208ENST00000449264 PTPN1P18031 435 aaKnown RBP15.54■□□□□ 0.08
TNF-208ENST00000449264 TSPY1Q01534 308 aa15.54■□□□□ 0.08
TNF-208ENST00000449264 CYP27A1Q02318 531 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms