RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 METTL23Q86XA0 190 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 GJD3Q8N144 294 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 TMEM86AQ8N2M4 240 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 TAF4BQ92750 862 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 TATDN2Q93075 761 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 PABPC5Q96DU9 382 aaKnown RBP11.39□□□□□ -0.59
SMPD4-211ENST00000449159 ARID3AQ99856 593 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 TUBGCP2Q9BSJ2 902 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 IMPG2Q9BZV3 1241 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 NIF3L1Q9GZT8 377 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 CBX8Q9HC52 389 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 MAN1C1Q9NR34 630 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 TAB2Q9NYJ8 693 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 CLEC1BQ9P126 229 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 MAGEC2Q9UBF1 373 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-211ENST00000449159 MYH10P35580 1976 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 H3BQ06 376 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-211ENST00000449159 GABRDO14764 452 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 PMM2O15305 246 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 N4BP1O75113 896 aaKnown RBP11.38□□□□□ -0.59
SMPD4-211ENST00000449159 ATP1A3P13637 1013 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 ALADP13716 330 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 PRKCSHP14314 528 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-211ENST00000449159 CPB1P15086 417 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 ZNF18P17022 549 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 EEF1GP26641 437 aaKnown RBP11.38□□□□□ -0.59
SMPD4-211ENST00000449159 LRMPQ12912 555 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 RAB33AQ14088 237 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 CLUL1Q15846 466 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 MAN2A1Q16706 1144 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 LRRTM3Q86VH5 581 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 C12orf76Q8N812 135 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-211ENST00000449159 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-211ENST00000449159 LMO3Q8TAP4 145 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 PGLYRP2Q96PD5 576 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 CRACR2AQ9BSW2 395 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 DDX43Q9NXZ2 648 aaKnown RBP11.38□□□□□ -0.59
SMPD4-211ENST00000449159 GCNT4Q9P109 453 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 HMGXB4Q9UGU5 601 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 FBXW11Q9UKB1 542 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 FAM50BQ9Y247 325 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 KMT2EQ8IZD2 1858 aa11.38□□□□□ -0.59
SMPD4-211ENST00000449159 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 OR6C75A6NL08 312 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 P4HA2O15460 535 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 ATP2C2O75185 946 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 TACC1O75410 805 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 RFPL2O75678 378 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 ABLIM3O94929 683 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 SEC24AO95486 1093 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 PDGFRBP09619 1106 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 WEE2P0C1S8 567 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 WARSP23381 471 aaKnown RBP11.37□□□□□ -0.59
SMPD4-211ENST00000449159 PSMC1P62191 440 aaKnown RBP11.37□□□□□ -0.59
SMPD4-211ENST00000449159 APBA1Q02410 837 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 ORC1Q13415 861 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 VWA3BQ502W6 1294 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 SLC39A12Q504Y0 691 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 TMEM184AQ6ZMB5 413 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 RNF19BQ6ZMZ0 732 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 DPH6Q7L8W6 267 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 APTXQ7Z2E3 356 aaKnown RBP11.37□□□□□ -0.59
SMPD4-211ENST00000449159 LUZP1Q86V48 1076 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 PPFIBP1Q86W92 1011 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 THEM5Q8N1Q8 247 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 TTC9BQ8N6N2 239 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 KREMEN2Q8NCW0 462 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 OR6B3Q8NGW1 331 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 PKMYT1Q99640 499 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 LPIN3Q9BQK8 851 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 APOL5Q9BWW9 433 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 BCO2Q9BYV7 579 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 INTS2Q9H0H0 1204 aaKnown RBP11.37□□□□□ -0.59
SMPD4-211ENST00000449159 ZCWPW1Q9H0M4 648 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 VPS16Q9H269 839 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 CRISPLD1Q9H336 500 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 SNX25Q9H3E2 840 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 NDST4Q9H3R1 872 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 DPEP3Q9H4B8 488 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 TMLHEQ9NVH6 421 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 CDH22Q9UJ99 828 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 DENND4AQ7Z401 1863 aa11.37□□□□□ -0.59
SMPD4-211ENST00000449159 NOTCH4Q99466 2003 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 FSD2A1L4K1 749 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 MTMR11A4FU01 709 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 PES1O00541 588 aaKnown RBP11.36□□□□□ -0.59
SMPD4-211ENST00000449159 DCXO43602 365 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 NCK2O43639 380 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 P4HA1P13674 534 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 CD58P19256 250 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 SLC9A1P19634 815 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 GNL1P36915 607 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-211ENST00000449159 LHX1P48742 406 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 COPB1P53618 953 aaKnown RBP11.36□□□□□ -0.59
SMPD4-211ENST00000449159 ADCY1Q08828 1119 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 GPR17Q13304 367 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 CUL2Q13617 745 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 WDR44Q5JSH3 913 aa11.36□□□□□ -0.59
SMPD4-211ENST00000449159 INTS6LQ5JSJ4 861 aaKnown RBP11.36□□□□□ -0.59
SMPD4-211ENST00000449159 ANKRD54Q6NXT1 300 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms