RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 EIF1ADQ8N9N8 165 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 PCSK9Q8NBP7 692 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 MAIP1Q8WWC4 291 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 CD101Q93033 1021 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 TMEM176AQ96HP8 235 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 CAPNS2Q96L46 248 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 RNPC3Q96LT9 517 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 KRT12Q99456 494 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 HMX1Q9NP08 348 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 XPNPEP3Q9NQH7 507 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 SMARCAL1Q9NZC9 954 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 BARX2Q9UMQ3 279 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 POLIQ9UNA4 740 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 TRPV2Q9Y5S1 764 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 CILPO75339 1184 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 PROSCO94903 275 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 SEC31AO94979 1220 aaKnown RBP11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 GNRH1P01148 92 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 CALCAP01258 141 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 FGGP02679 453 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 BRD2P25440 801 aaKnown RBP11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 CST5P28325 142 aaPredicted RBP11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 MAN1A1P33908 653 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 PNPLA4P41247 253 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 RAD23BP54727 409 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 RNASE9P60153 205 aaKnown RBP11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 ZNF200P98182 395 aaPredicted RBP11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 PTPN11Q06124 597 aaPredicted RBP11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 CACNB2Q08289 660 aaPredicted RBP11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 ZBTB6Q15916 424 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 PTPROQ16827 1216 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 NBPF20Q3BBV1 942 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 ALKAL1Q6UXT8 129 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 MMS22LQ6ZRQ5 1243 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 RPAINQ86UA6 219 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 ZNF560Q96MR9 790 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 RUNDC3BQ96NL0 473 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 EIF2AQ9BY44 585 aaKnown RBP11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 PPP1R12CQ9BZL4 782 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 MIS12Q9H081 205 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 WDR35Q9P2L0 1181 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 IP6K2Q9UHH9 426 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 MTUS1Q9ULD2 1270 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 L1RE1Q9UN81 338 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 TRIP11Q15643 1979 aa11.21□□□□□ -0.61
VIPAS39-203ENST00000448935 MYADML2A6NDP7 307 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 GPR37L1O60883 481 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 ADAMTS4O75173 837 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 CABYRO75952 493 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 RECQL4O94761 1208 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 PGK1P00558 417 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 HMGCRP04035 888 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 KCNE1P15382 129 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 CYP3A5P20815 502 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 PEX5P50542 639 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 PTP4A2Q12974 167 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 MAMLD1Q13495 774 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 ARHGEF6Q15052 776 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 SCARA3Q6AZY7 606 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 CXCL17Q6UXB2 119 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 FEZF2Q8TBJ5 459 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 TMEM40Q8WWA1 233 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 NT5C1AQ9BXI3 368 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 FUT8Q9BYC5 575 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 SMYD3Q9H7B4 428 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 CHST12Q9NRB3 414 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 MAP2K7O14733 419 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 PSTPIP1O43586 416 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 HEXIM1O94992 359 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 CFHP08603 1231 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 CETN2P41208 172 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 RAP1GAPP47736 663 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 GCGRP47871 477 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 EPHB4P54760 987 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 CDH8P55286 799 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 GSCP56915 257 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 PAK2Q13177 524 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 CNGA2Q16280 664 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 SGO2Q562F6 1265 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 XKR4Q5GH76 650 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 FAM47CQ5HY64 1035 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 TWF2Q6IBS0 349 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 GPR153Q6NV75 609 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 DNAJC24Q6P3W2 148 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 EMBQ6PCB8 327 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 SERINC5Q86VE9 423 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 UNC93AQ86WB7 457 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 RHOT1Q8IXI2 618 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 KLHL7Q8IXQ5 586 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 SLC4A11Q8NBS3 891 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 C1orf131Q8NDD1 294 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 KLHDC9Q8NEP7 349 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 ALG3Q92685 438 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 SDCBP2Q9H190 292 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 NXF3Q9H4D5 531 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 VIPAS39Q9H9C1 493 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 GDF3Q9NR23 364 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 FAM53CQ9NYF3 392 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms