RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 HUS1O60921 280 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 CST3P01034 146 aaPredicted RBP26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 NR2F2P24468 414 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 HOXA9P31269 272 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 PRCPP42785 496 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 UBE2HP62256 183 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 MYO1EQ12965 1108 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 SPATA20Q8TB22 786 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 PARD3BQ8TEW8 1205 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 ARHGEF3Q9NR81 526 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 HCFC1R1Q9NWW0 138 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 L1RE1Q9UN81 338 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 FRMD4BQ9Y2L6 1034 aa26.9■■□□□ 1.9
HTATSF1-203ENST00000448450 TSC2P49815 1807 aa26.89■■□□□ 1.9
HTATSF1-203ENST00000448450 LMNAP02545 664 aaKnown RBP26.89■■□□□ 1.9
HTATSF1-203ENST00000448450 LRG1P02750 347 aa26.89■■□□□ 1.9
HTATSF1-203ENST00000448450 GPR17Q13304 367 aa26.89■■□□□ 1.9
HTATSF1-203ENST00000448450 MYBPC2Q14324 1141 aa26.89■■□□□ 1.9
HTATSF1-203ENST00000448450 PHLDB3Q6NSJ2 640 aa26.89■■□□□ 1.9
HTATSF1-203ENST00000448450 RTL10Q7L3V2 364 aa26.89■■□□□ 1.9
HTATSF1-203ENST00000448450 PDCL2Q8N4E4 241 aa26.89■■□□□ 1.9
HTATSF1-203ENST00000448450 TMEM174Q8WUU8 243 aa26.89■■□□□ 1.9
HTATSF1-203ENST00000448450 LRRIQ3A6PVS8 624 aaPredicted RBP26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 ANHXE9PGG2 379 aa26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 PHACTR2O75167 634 aa26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 VNN2O95498 520 aa26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 DLG4P78352 724 aa26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 HTR4Q13639 388 aa26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 ELOA2Q8IYF1 753 aaPredicted RBP26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 GDAP2Q9NXN4 497 aa26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 MAN1B1Q9UKM7 699 aa26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 SLC27A5Q9Y2P5 690 aa26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 INSL5Q9Y5Q6 135 aa26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 ZFP37Q9Y6Q3 630 aaPredicted RBP26.88■■□□□ 1.89
HTATSF1-203ENST00000448450 FSHRP23945 695 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 RPL13P26373 211 aaKnown RBP26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 DUSP4Q13115 394 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 ADAM9Q13443 819 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 BIRC3Q13489 604 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 TRPC3Q13507 836 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 SLC39A12Q504Y0 691 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 ZC3H14Q6PJT7 736 aaKnown RBP26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 ATAD1Q8NBU5 361 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 EEF2KMTQ96G04 330 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 ZCWPW1Q9H0M4 648 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 CRISPLD1Q9H336 500 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 SLC2A4RGQ9NR83 387 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 DNMT3BQ9UBC3 853 aaKnown RBP26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 SIT1Q9Y3P8 196 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 NUMBLQ9Y6R0 609 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 R4GN57 208 aa26.87■■□□□ 1.89
HTATSF1-203ENST00000448450 AKAP3O75969 853 aa26.86■■□□□ 1.89
HTATSF1-203ENST00000448450 DCNP07585 359 aaKnown RBP26.86■■□□□ 1.89
HTATSF1-203ENST00000448450 TWF1Q12792 350 aa26.86■■□□□ 1.89
HTATSF1-203ENST00000448450 NFIL3Q16649 462 aa26.86■■□□□ 1.89
HTATSF1-203ENST00000448450 ZCWPW2Q504Y3 356 aa26.86■■□□□ 1.89
HTATSF1-203ENST00000448450 OSTM1Q86WC4 334 aa26.86■■□□□ 1.89
HTATSF1-203ENST00000448450 DDX43Q9NXZ2 648 aaKnown RBP26.86■■□□□ 1.89
HTATSF1-203ENST00000448450 MAFFQ9ULX9 164 aa26.86■■□□□ 1.89
HTATSF1-203ENST00000448450 MTMR11A4FU01 709 aa26.85■■□□□ 1.89
HTATSF1-203ENST00000448450 BIN1O00499 593 aa26.85■■□□□ 1.89
HTATSF1-203ENST00000448450 ACAT1P24752 427 aaKnown RBP26.85■■□□□ 1.89
HTATSF1-203ENST00000448450 MYL6P60660 151 aa26.85■■□□□ 1.89
HTATSF1-203ENST00000448450 SOWAHAQ2M3V2 549 aa26.85■■□□□ 1.89
HTATSF1-203ENST00000448450 CENPPQ6IPU0 288 aa26.85■■□□□ 1.89
HTATSF1-203ENST00000448450 LRRTM3Q86VH5 581 aa26.85■■□□□ 1.89
HTATSF1-203ENST00000448450 TOP6BLQ8N6T0 577 aa26.85■■□□□ 1.89
HTATSF1-203ENST00000448450 TMC2Q8TDI7 906 aa26.85■■□□□ 1.89
HTATSF1-203ENST00000448450 MMS19Q96T76 1030 aa26.85■■□□□ 1.89
HTATSF1-203ENST00000448450 MIA3Q5JRA6 1907 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 FANCMQ8IYD8 2048 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 CLSTN1O94985 981 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 POU2F2P09086 479 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 PTPN2P17706 415 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 CAMK4Q16566 473 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 PABPC1LQ4VXU2 614 aaKnown RBP26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 TDRD10Q5VZ19 366 aaKnown RBP26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 FAM186BQ8IYM0 893 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 ADGRF2Q8IZF7 708 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 TMEM86AQ8N2M4 240 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 TTC9BQ8N6N2 239 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 IPO9Q96P70 1041 aaKnown RBP26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 CORO1BQ9BR76 489 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 YIPF1Q9Y548 306 aa26.84■■□□□ 1.89
HTATSF1-203ENST00000448450 HCRTO43612 131 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 SOAT2O75908 522 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 C4BPAP04003 597 aaKnown RBP26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 PSMC2P35998 433 aaKnown RBP26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 VAMP7P51809 220 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 AP3M2P53677 418 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 CLDN10P78369 228 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 EDRF1Q3B7T1 1238 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 COBLL1Q53SF7 1204 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 ANKRD40Q6AI12 368 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 ELMOD1Q8N336 334 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 PJA1Q8NG27 643 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 ITFG1Q8TB96 612 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 ELMO3Q96BJ8 720 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 SHDQ96IW2 340 aa26.83■■□□□ 1.89
HTATSF1-203ENST00000448450 TSG101Q99816 390 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms