RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 FSCN2O14926 492 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 CBFA2T2O43439 604 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 TBC1D4O60343 1298 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 NOL4O94818 638 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 CLSTN1O94985 981 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 WARSP23381 471 aaKnown RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 TBXAS1P24557 533 aaPredicted RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 LMO2P25791 158 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 GNL1P36915 607 aaPredicted RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 LHX1P48742 406 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 GLUD2P49448 558 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 KLK7P49862 253 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 PTPN5P54829 565 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 GCNT1Q02742 428 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 YWHAHQ04917 246 aaPredicted RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 CUL2Q13617 745 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 BMS1Q14692 1282 aaKnown RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 GRIN2CQ14957 1233 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 SYCP1Q15431 976 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 OVOS1Q6IE37 1185 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 PDE12Q6L8Q7 609 aaKnown RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 GJB7Q6PEY0 223 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 ANKS3Q6ZW76 656 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 RRAGAQ7L523 313 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 ARHGEF19Q8IW93 802 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 PPM1KQ8N3J5 372 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 SPATA18Q8TC71 538 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 MICAL1Q8TDZ2 1067 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 GDPD5Q8WTR4 605 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 KBTBD7Q8WVZ9 684 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 RIN2Q8WYP3 895 aaPredicted RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 PIK3R5Q8WYR1 880 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 FAM81BQ96LP2 452 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 TCF25Q9BQ70 676 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 RTP3Q9BQQ7 232 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 MRPL45Q9BRJ2 306 aaKnown RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 LSM14BQ9BX40 385 aaKnown RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 XPO4Q9C0E2 1151 aaKnown RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 LMAN2LQ9H0V9 348 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 ZBP1Q9H171 429 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 SDCBP2Q9H190 292 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 SNX25Q9H3E2 840 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 PRDM12Q9H4Q4 367 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 SMYD3Q9H7B4 428 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 NGRNQ9NPE2 291 aaKnown RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 PLCB1Q9NQ66 1216 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 TLR9Q9NR96 1032 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 MRPL17Q9NRX2 175 aaKnown RBP8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 APEX2Q9UBZ4 518 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 SSX2IPQ9Y2D8 614 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 PDCD11Q14690 1871 aaKnown RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 C2orf71A6NGG8 1288 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 H7C4K7 107 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 C2CD2LO14523 706 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 URODP06132 367 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 TPM3P06753 285 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 PDGFRBP09619 1106 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 UCHL3P15374 230 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 IRS1P35568 1242 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 PBX1P40424 430 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 RAP1GAPP47736 663 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 MFAP3P55082 362 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 MMRN1Q13201 1228 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 SMC1AQ14683 1233 aaKnown RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 PTPN14Q15678 1187 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 PTPN21Q16825 1174 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 PTPROQ16827 1216 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 CTXN3Q4LDR2 81 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 ZNF697Q5TEC3 545 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 PDXDC1Q6P996 788 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 PRSS55Q6UWB4 352 aaPredicted RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 RSPO2Q6UXX9 243 aaPredicted RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 SCARA5Q6ZMJ2 495 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 ENOSF1Q7L5Y1 443 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 OSTM1Q86WC4 334 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 ADGRF2Q8IZF7 708 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 THEM5Q8N1Q8 247 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 TTC39CQ8N584 583 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 NEK11Q8NG66 645 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 OR6B3Q8NGW1 331 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 AUTS2Q8WXX7 1259 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 KAT5Q92993 513 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 RNF166Q96A37 237 aaPredicted RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 JAKMIP2Q96AA8 810 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 MRPL38Q96DV4 380 aaKnown RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 PCMTD1Q96MG8 357 aaPredicted RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 KREMEN1Q96MU8 473 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 ARID3AQ99856 593 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 CLSTN3Q9BQT9 956 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 ACBD6Q9BR61 282 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 NAA15Q9BXJ9 866 aaKnown RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 OXCT2Q9BYC2 517 aaPredicted RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 TRIM5Q9C035 493 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 FAM124BQ9H5Z6 455 aaPredicted RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 RXFP1Q9HBX9 757 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 ENTPD7Q9NQZ7 604 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 CISHQ9NSE2 258 aa8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 FAM207AQ9NSI2 230 aaPredicted RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 DDX43Q9NXZ2 648 aaKnown RBP8.06□□□□□ -1.12
AC004540.1-206ENST00000448056 FNIP2Q9P278 1114 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms