RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 FGF13Q92913 245 aa26.79■■□□□ 1.88
UFD1-204ENST00000447868 SYAP1Q96A49 352 aaPredicted RBP26.79■■□□□ 1.88
UFD1-204ENST00000447868 SMOC2Q9H3U7 446 aa26.79■■□□□ 1.88
UFD1-204ENST00000447868 TMLHEQ9NVH6 421 aa26.79■■□□□ 1.88
UFD1-204ENST00000447868 NXF1Q9UBU9 619 aaKnown RBP26.79■■□□□ 1.88
UFD1-204ENST00000447868 CDH7Q9ULB5 785 aa26.79■■□□□ 1.88
UFD1-204ENST00000447868 SORCS3Q9UPU3 1222 aa26.79■■□□□ 1.88
UFD1-204ENST00000447868 TRIM49BA6NDI0 452 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 GABRDO14764 452 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 CETN3O15182 167 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 VNN1O95497 513 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 ATICP31939 592 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 PMS1P54277 932 aaKnown RBP26.78■■□□□ 1.88
UFD1-204ENST00000447868 STIM1Q13586 685 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 MTMR3Q13615 1198 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 CAMK4Q16566 473 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 MGAT5BQ3V5L5 792 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 INTS6LQ5JSJ4 861 aaKnown RBP26.78■■□□□ 1.88
UFD1-204ENST00000447868 C1orf220Q5T0J3 134 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 ANKRD40Q6AI12 368 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 LIMS2Q7Z4I7 341 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 C2orf15Q8WU43 125 aaKnown RBP26.78■■□□□ 1.88
UFD1-204ENST00000447868 RSAD2Q8WXG1 361 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 ELMO3Q96BJ8 720 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 IPO9Q96P70 1041 aaKnown RBP26.78■■□□□ 1.88
UFD1-204ENST00000447868 XYLT2Q9H1B5 865 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 KCNK12Q9HB15 430 aa26.78■■□□□ 1.88
UFD1-204ENST00000447868 IKBKBO14920 756 aa26.77■■□□□ 1.88
UFD1-204ENST00000447868 CD44P16070 742 aaKnown RBP26.77■■□□□ 1.88
UFD1-204ENST00000447868 PCSK1P29120 753 aa26.77■■□□□ 1.88
UFD1-204ENST00000447868 SMARCB1Q12824 385 aa26.77■■□□□ 1.88
UFD1-204ENST00000447868 ZNF699Q32M78 642 aa26.77■■□□□ 1.88
UFD1-204ENST00000447868 PDZD4Q76G19 769 aaPredicted RBP26.77■■□□□ 1.88
UFD1-204ENST00000447868 SV2AQ7L0J3 742 aa26.77■■□□□ 1.88
UFD1-204ENST00000447868 SPPL2BQ8TCT7 592 aa26.77■■□□□ 1.88
UFD1-204ENST00000447868 MRPL45Q9BRJ2 306 aaKnown RBP26.77■■□□□ 1.88
UFD1-204ENST00000447868 MMRN2Q9H8L6 949 aa26.77■■□□□ 1.88
UFD1-204ENST00000447868 HSFX1Q9UBD0 423 aa26.77■■□□□ 1.88
UFD1-204ENST00000447868 PCDHB5Q9Y5E4 795 aa26.77■■□□□ 1.88
UFD1-204ENST00000447868 PSMA7O14818 248 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 GPR37L1O60883 481 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 STAU1O95793 577 aaKnown RBP26.76■■□□□ 1.87
UFD1-204ENST00000447868 PDGFRBP09619 1106 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 EPB41P11171 864 aaKnown RBP26.76■■□□□ 1.87
UFD1-204ENST00000447868 MYL4P12829 197 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 WARSP23381 471 aaKnown RBP26.76■■□□□ 1.87
UFD1-204ENST00000447868 LMO2P25791 158 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 TUFMP49411 452 aaKnown RBP26.76■■□□□ 1.87
UFD1-204ENST00000447868 MORC3Q14149 939 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 CCDC142Q17RM4 750 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 ZACNQ401N2 412 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 CYP4A22Q5TCH4 519 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 FAM200AQ8TCP9 573 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 TCEAL4Q96EI5 215 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 PI4K2AQ9BTU6 479 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 DNAJC25Q9H1X3 360 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 SNX25Q9H3E2 840 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 AVENQ9NQS1 362 aaPredicted RBP26.76■■□□□ 1.87
UFD1-204ENST00000447868 ASAH2Q9NR71 780 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 IGSF9Q9P2J2 1179 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 GTF3C4Q9UKN8 822 aa26.76■■□□□ 1.87
UFD1-204ENST00000447868 ZFP37Q9Y6Q3 630 aaPredicted RBP26.76■■□□□ 1.87
UFD1-204ENST00000447868 ATP2C2O75185 946 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 CEBPBP17676 345 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 BMP6P22004 513 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 CCR2P41597 374 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 PIK3CAP42336 1068 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 GCLMP48507 274 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 PSMC1P62191 440 aaKnown RBP26.75■■□□□ 1.87
UFD1-204ENST00000447868 NFE2Q16621 373 aaPredicted RBP26.75■■□□□ 1.87
UFD1-204ENST00000447868 PRSS36Q5K4E3 855 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 KLHL10Q6JEL2 608 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 TRIM67Q6ZTA4 783 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 NPAS3Q8IXF0 933 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 DHTKD1Q96HY7 919 aaPredicted RBP26.75■■□□□ 1.87
UFD1-204ENST00000447868 PKMYT1Q99640 499 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 LPIN3Q9BQK8 851 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 SYT15Q9BQS2 421 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 LRFN3Q9BTN0 628 aa26.75■■□□□ 1.87
UFD1-204ENST00000447868 HAPLN1P10915 354 aaPredicted RBP26.74■■□□□ 1.87
UFD1-204ENST00000447868 CCNE1P24864 410 aa26.74■■□□□ 1.87
UFD1-204ENST00000447868 GNL1P36915 607 aaPredicted RBP26.74■■□□□ 1.87
UFD1-204ENST00000447868 LRRC63Q05C16 580 aa26.74■■□□□ 1.87
UFD1-204ENST00000447868 PPP3CAQ08209 521 aa26.74■■□□□ 1.87
UFD1-204ENST00000447868 TDGQ13569 410 aa26.74■■□□□ 1.87
UFD1-204ENST00000447868 ZNF667Q5HYK9 610 aa26.74■■□□□ 1.87
UFD1-204ENST00000447868 SCARA5Q6ZMJ2 495 aa26.74■■□□□ 1.87
UFD1-204ENST00000447868 OR6B3Q8NGW1 331 aa26.74■■□□□ 1.87
UFD1-204ENST00000447868 MCRS1Q96EZ8 462 aa26.74■■□□□ 1.87
UFD1-204ENST00000447868 MKNK1Q9BUB5 465 aa26.74■■□□□ 1.87
UFD1-204ENST00000447868 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.74■■□□□ 1.877e-8■■■■■ 72.4
UFD1-204ENST00000447868 CDH9Q9ULB4 789 aa26.74■■□□□ 1.87
UFD1-204ENST00000447868 MYBPHLA2RUH7 354 aa26.73■■□□□ 1.87
UFD1-204ENST00000447868 NRG2O14511 850 aaPredicted RBP26.73■■□□□ 1.87
UFD1-204ENST00000447868 ZNF197O14709 1029 aa26.73■■□□□ 1.87
UFD1-204ENST00000447868 TACC1O75410 805 aa26.73■■□□□ 1.87
UFD1-204ENST00000447868 HLA-DRAP01903 254 aa26.73■■□□□ 1.87
UFD1-204ENST00000447868 GJA1P17302 382 aa26.73■■□□□ 1.87
UFD1-204ENST00000447868 ATF6P18850 670 aa26.73■■□□□ 1.87
UFD1-204ENST00000447868 PPP1R2P41236 205 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms