RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ZNF75CPQ92670 426 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 TBC1D10AQ9BXI6 508 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 MAK16Q9BXY0 300 aaKnown RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 RBAKQ9NYW8 714 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 SEPT9Q9UHD8 586 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 FARP1Q9Y4F1 1045 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 NUB1Q9Y5A7 615 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 A0A1W2PPM1 405 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 LSM8O95777 96 aaKnown RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 SSTR3P32745 418 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 CDKN2BP42772 138 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 PSEN1P49768 467 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 PRKCEQ02156 737 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 ZFYVE27Q5T4F4 411 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 OTOAQ7RTW8 1153 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 ENDOVQ8N8Q3 282 aaKnown RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 SLC35B2Q8TB61 432 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 STK32AQ8WU08 396 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 HAPLN2Q9GZV7 340 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 TLE6Q9H808 572 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 SAR1AQ9NR31 198 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 NKX1-2Q9UD57 310 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-204ENST00000447182 LRRC42Q9Y546 428 aa20.11■□□□□ 0.81
SDCBP-204ENST00000447182 HNRNPCL1O60812 293 aaKnown RBP20.1■□□□□ 0.81
SDCBP-204ENST00000447182 NR3C2P08235 984 aa20.1■□□□□ 0.81
SDCBP-204ENST00000447182 GPX6P59796 221 aa20.1■□□□□ 0.81
SDCBP-204ENST00000447182 TAP1Q03518 808 aa20.1■□□□□ 0.81
SDCBP-204ENST00000447182 PIGHQ14442 188 aaPredicted RBP20.1■□□□□ 0.81
SDCBP-204ENST00000447182 HIF1AQ16665 826 aa20.1■□□□□ 0.81
SDCBP-204ENST00000447182 HP1BP3Q5SSJ5 553 aaPredicted RBP20.1■□□□□ 0.81
SDCBP-204ENST00000447182 LVRNQ6Q4G3 990 aa20.1■□□□□ 0.81
SDCBP-204ENST00000447182 NIPA2Q8N8Q9 360 aa20.1■□□□□ 0.81
SDCBP-204ENST00000447182 LNPEPQ9UIQ6 1025 aa20.1■□□□□ 0.81
SDCBP-204ENST00000447182 RABGEF1Q9UJ41 708 aa20.1■□□□□ 0.81
SDCBP-204ENST00000447182 SIP14410 1827 aa20.1■□□□□ 0.81
SDCBP-204ENST00000447182 MYH9P35579 1960 aaKnown RBP20.1■□□□□ 0.81
SDCBP-204ENST00000447182 F8VP50 259 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 RAD17O75943 681 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 FGFR1P11362 822 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 PHBP35232 272 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 BLMHQ13867 455 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 CCDC125Q86Z20 511 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 CCDC60Q8IWA6 550 aaPredicted RBP20.09■□□□□ 0.81
SDCBP-204ENST00000447182 DHRS4Q9BTZ2 278 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 CLUHO75153 1309 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 SMNDC1O75940 238 aaKnown RBP eCLIP20.09■□□□□ 0.81
SDCBP-204ENST00000447182 ECM2O94769 699 aaPredicted RBP20.09■□□□□ 0.81
SDCBP-204ENST00000447182 TPBGLP0DKB5 382 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 KRT4P19013 534 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 PTPN4P29074 926 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 CMPK2Q5EBM0 449 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 PPP1R15BQ5SWA1 713 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 FYB2Q5VWT5 728 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 ADGRD1Q6QNK2 874 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 NAF1Q96HR8 494 aaKnown RBP20.09■□□□□ 0.81
SDCBP-204ENST00000447182 MCEEQ96PE7 176 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 TMEM121Q9BTD3 319 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 JPH1Q9HDC5 661 aaPredicted RBP20.09■□□□□ 0.81
SDCBP-204ENST00000447182 EFR3BQ9Y2G0 817 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 CTDP1Q9Y5B0 961 aaPredicted RBP20.09■□□□□ 0.81
SDCBP-204ENST00000447182 SNCAIPQ9Y6H5 919 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 CNTNAP2Q9UHC6 1331 aa20.09■□□□□ 0.81
SDCBP-204ENST00000447182 SGK1O00141 431 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 PLSCR1O15162 318 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 GM2AP17900 193 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 OGDHQ02218 1023 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 BAATQ14032 418 aaPredicted RBP20.08■□□□□ 0.81
SDCBP-204ENST00000447182 TAF11Q15544 211 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 XKR3Q5GH77 459 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 DNAJC24Q6P3W2 148 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 ABHD15Q6UXT9 468 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 CAPN12Q6ZSI9 719 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 NLRP9Q7RTR0 991 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 LONP2Q86WA8 852 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 ZNF276Q8N554 614 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 ATP11CQ8NB49 1132 aa20.08■□□□□ 0.81
SDCBP-204ENST00000447182 FRMD8P1Q9BZ68 369 aaPredicted RBP20.08■□□□□ 0.81
SDCBP-204ENST00000447182 ZMYND8Q9ULU4 1186 aaPredicted RBP20.08■□□□□ 0.81
SDCBP-204ENST00000447182 TM9SF1O15321 606 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 GLRA2P23416 452 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 NCOA4Q13772 614 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 EMC2Q15006 297 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 TXNRD3NBQ6F5E7 133 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 DCUN1D2Q6PH85 259 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 POLNQ7Z5Q5 900 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 PPIL6Q8IXY8 311 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 CFAP61Q8NHU2 1237 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 MZB1Q8WU39 189 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 ALKBH8Q96BT7 664 aaKnown RBP20.08■□□□□ 0.8
SDCBP-204ENST00000447182 ZNF518BQ9C0D4 1074 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 SLC9A2Q9UBY0 812 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 ZFP69BQ9UJL9 534 aa20.08■□□□□ 0.8
SDCBP-204ENST00000447182 CORO1CQ9ULV4 474 aaPredicted RBP20.08■□□□□ 0.8
SDCBP-204ENST00000447182 A0A0B4J269 797 aa20.07■□□□□ 0.8
SDCBP-204ENST00000447182 LRRD1A4D1F6 860 aa20.07■□□□□ 0.8
SDCBP-204ENST00000447182 E7ESA3 106 aa20.07■□□□□ 0.8
SDCBP-204ENST00000447182 RGS20O76081 388 aa20.07■□□□□ 0.8
SDCBP-204ENST00000447182 CBX6O95503 412 aa20.07■□□□□ 0.8
SDCBP-204ENST00000447182 CTC1Q2NKJ3 1217 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms