RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 NFICP08651 508 aa26.36■■□□□ 1.81
PMS1-214ENST00000446877 ZNF806P0C7X5 589 aa26.36■■□□□ 1.81
PMS1-214ENST00000446877 ATF6P18850 670 aa26.36■■□□□ 1.81
PMS1-214ENST00000446877 HOXC13P31276 330 aa26.36■■□□□ 1.81
PMS1-214ENST00000446877 AVPR1AP37288 418 aa26.36■■□□□ 1.81
PMS1-214ENST00000446877 PXNP49023 591 aaPredicted RBP26.36■■□□□ 1.81
PMS1-214ENST00000446877 CDR1P51861 262 aa26.36■■□□□ 1.81
PMS1-214ENST00000446877 SF3A2Q15428 464 aaKnown RBP26.36■■□□□ 1.81
PMS1-214ENST00000446877 TMEM119Q4V9L6 283 aa26.36■■□□□ 1.81
PMS1-214ENST00000446877 GPBP1Q86WP2 473 aa26.36■■□□□ 1.81
PMS1-214ENST00000446877 CMTM8Q8IZV2 173 aa26.36■■□□□ 1.81
PMS1-214ENST00000446877 REEP2Q9BRK0 252 aa26.36■■□□□ 1.81
PMS1-214ENST00000446877 PARVGQ9HBI0 331 aa26.36■■□□□ 1.81
PMS1-214ENST00000446877 CPSF3Q9UKF6 684 aaKnown RBP26.36■■□□□ 1.81
PMS1-214ENST00000446877 KRT18P05783 430 aaKnown RBP26.35■■□□□ 1.81
PMS1-214ENST00000446877 MAP1BP46821 2468 aaKnown RBP26.35■■□□□ 1.81
PMS1-214ENST00000446877 BFSP1Q12934 665 aa26.35■■□□□ 1.81
PMS1-214ENST00000446877 RUNX3Q13761 415 aa26.35■■□□□ 1.81
PMS1-214ENST00000446877 DHX8Q14562 1220 aaKnown RBP26.35■■□□□ 1.81
PMS1-214ENST00000446877 CCDC6Q16204 474 aa26.35■■□□□ 1.81
PMS1-214ENST00000446877 TMEM196Q5HYL7 178 aa26.35■■□□□ 1.81
PMS1-214ENST00000446877 SPPL2BQ8TCT7 592 aa26.35■■□□□ 1.81
PMS1-214ENST00000446877 FAM83CQ9BQN1 747 aa26.35■■□□□ 1.81
PMS1-214ENST00000446877 ZHX3Q9H4I2 956 aa26.35■■□□□ 1.81
PMS1-214ENST00000446877 ANGPTL2Q9UKU9 493 aa26.35■■□□□ 1.81
PMS1-214ENST00000446877 ANO9A1A5B4 782 aa26.34■■□□□ 1.81
PMS1-214ENST00000446877 TRAK2O60296 914 aa26.34■■□□□ 1.81
PMS1-214ENST00000446877 EPN2O95208 641 aa26.34■■□□□ 1.81
PMS1-214ENST00000446877 ABCD1P33897 745 aa26.34■■□□□ 1.81
PMS1-214ENST00000446877 ARL6IP4Q66PJ3 421 aaKnown RBP26.34■■□□□ 1.81
PMS1-214ENST00000446877 CC2D1AQ6P1N0 951 aaPredicted RBP26.34■■□□□ 1.81
PMS1-214ENST00000446877 KBTBD6Q86V97 674 aa26.34■■□□□ 1.81
PMS1-214ENST00000446877 EXOC4Q96A65 974 aa26.34■■□□□ 1.81
PMS1-214ENST00000446877 CALML4Q96GE6 196 aa26.34■■□□□ 1.81
PMS1-214ENST00000446877 PYM1Q9BRP8 204 aaKnown RBP26.34■■□□□ 1.81
PMS1-214ENST00000446877 ASB7Q9H672 318 aa26.34■■□□□ 1.81
PMS1-214ENST00000446877 ABI2Q9NYB9 513 aaPredicted RBP26.34■■□□□ 1.81
PMS1-214ENST00000446877 TRDMT1O14717 391 aaKnown RBP26.33■■□□□ 1.81
PMS1-214ENST00000446877 SLC26A4O43511 780 aa26.33■■□□□ 1.81
PMS1-214ENST00000446877 HAPLN1P10915 354 aaPredicted RBP26.33■■□□□ 1.81
PMS1-214ENST00000446877 DDX6P26196 483 aaKnown RBP eCLIP26.33■■□□□ 1.81
PMS1-214ENST00000446877 UBA7P41226 1012 aa26.33■■□□□ 1.81
PMS1-214ENST00000446877 RAP1GAPP47736 663 aa26.33■■□□□ 1.81
PMS1-214ENST00000446877 TAF6P49848 677 aa26.33■■□□□ 1.81
PMS1-214ENST00000446877 FSTL4Q6MZW2 842 aa26.33■■□□□ 1.81
PMS1-214ENST00000446877 PKN3Q6P5Z2 889 aa26.33■■□□□ 1.81
PMS1-214ENST00000446877 DCP1BQ8IZD4 617 aaKnown RBP26.33■■□□□ 1.81
PMS1-214ENST00000446877 MAB21L3Q8N8X9 362 aa26.33■■□□□ 1.81
PMS1-214ENST00000446877 AK8Q96MA6 479 aa26.33■■□□□ 1.81
PMS1-214ENST00000446877 EBF3Q9H4W6 596 aa26.33■■□□□ 1.81
PMS1-214ENST00000446877 C2CD2Q9Y426 696 aa26.33■■□□□ 1.81
PMS1-214ENST00000446877 CNOT1A5YKK6 2376 aaKnown RBP26.33■■□□□ 1.81
PMS1-214ENST00000446877 AKAP3O75969 853 aa26.32■■□□□ 1.8
PMS1-214ENST00000446877 ACOT2P49753 483 aa26.32■■□□□ 1.8
PMS1-214ENST00000446877 N4BP2L1Q5TBK1 243 aaPredicted RBP26.32■■□□□ 1.8
PMS1-214ENST00000446877 ADALQ6DHV7 355 aa26.32■■□□□ 1.8
PMS1-214ENST00000446877 CAMKK1Q8N5S9 505 aa26.32■■□□□ 1.8
PMS1-214ENST00000446877 KIF9Q9HAQ2 790 aa26.32■■□□□ 1.8
PMS1-214ENST00000446877 HPS4Q9NQG7 708 aa26.32■■□□□ 1.8
PMS1-214ENST00000446877 TDP1Q9NUW8 608 aa26.32■■□□□ 1.8
PMS1-214ENST00000446877 DPP3Q9NY33 737 aa26.32■■□□□ 1.8
PMS1-214ENST00000446877 PCDHGA5Q9Y5G8 931 aa26.32■■□□□ 1.8
PMS1-214ENST00000446877 SDK1Q7Z5N4 2213 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 TBCAO75347 108 aaKnown RBP26.31■■□□□ 1.8
PMS1-214ENST00000446877 ZNF131P52739 623 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 NLRP12P59046 1061 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 STPG1Q5TH74 334 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 WSCD1Q658N2 575 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 TRIM68Q6AZZ1 485 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 SLFN12LQ6IEE8 588 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 SLC39A4Q6P5W5 647 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 LRRTM3Q86VH5 581 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 MRPS31Q92665 395 aaKnown RBP26.31■■□□□ 1.8
PMS1-214ENST00000446877 USP13Q92995 863 aaPredicted RBP26.31■■□□□ 1.8
PMS1-214ENST00000446877 PPP4R2Q9NY27 417 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 CCL26Q9Y258 94 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 PCDHB5Q9Y5E4 795 aa26.31■■□□□ 1.8
PMS1-214ENST00000446877 ZFHX4Q86UP3 3567 aa26.3■■□□□ 1.8
PMS1-214ENST00000446877 PDCD11Q14690 1871 aaKnown RBP26.3■■□□□ 1.8
PMS1-214ENST00000446877 DRD1P21728 446 aa26.3■■□□□ 1.8
PMS1-214ENST00000446877 NMT1P30419 496 aaKnown RBP26.3■■□□□ 1.8
PMS1-214ENST00000446877 RASSF8Q8NHQ8 419 aa26.3■■□□□ 1.8
PMS1-214ENST00000446877 SOBPA7XYQ1 873 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 H3BQV1 296 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 TM4SF5O14894 197 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 RNF40O75150 1001 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 EGFP01133 1207 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 F11P03951 625 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 GTF2BQ00403 316 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 TSPY1Q01534 308 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 PDGFRLQ15198 375 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 SV2CQ496J9 727 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 ZC3H10Q96K80 434 aaKnown RBP26.29■■□□□ 1.8
PMS1-214ENST00000446877 VPS45Q9NRW7 570 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 RXFP3Q9NSD7 469 aa26.29■■□□□ 1.8
PMS1-214ENST00000446877 AGO2Q9UKV8 859 aaKnown RBP26.29■■□□□ 1.8
PMS1-214ENST00000446877 MAGED2Q9UNF1 606 aaPredicted RBP26.29■■□□□ 1.8
PMS1-214ENST00000446877 OTOL1A6NHN0 477 aaPredicted RBP26.28■■□□□ 1.8
PMS1-214ENST00000446877 KPNA7A9QM74 516 aa26.28■■□□□ 1.8
PMS1-214ENST00000446877 ANKRD63C9JTQ0 380 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms