RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 SGO2Q562F6 1265 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 ODF2Q5BJF6 829 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 SESTD1Q86VW0 696 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 CD302Q8IX05 232 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 DDX27Q96GQ7 796 aaKnown RBP10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 KATNAL1Q9BW62 490 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 FAM204AQ9H8W3 233 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 CYP3A43Q9HB55 503 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 TUBGCP4Q9UGJ1 667 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 SNX9Q9Y5X1 595 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 FAM187AA6NFU0 413 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 FAM155AB1AL88 458 aaPredicted RBP10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 M0QYV0 167 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 HAS3O00219 553 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PPEF2O14830 753 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 RECQL4O94761 1208 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 MICAL2O94851 1124 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PGK1P00558 417 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 KRT14P02533 472 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 RALAP11233 206 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 TCF4P15884 667 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PTGIRP43119 386 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PSMC4P43686 418 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PLTPP55058 493 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 SNX17Q15036 470 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PPP1R7Q15435 360 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PTPN20Q4JDL3 420 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 KAZNQ674X7 775 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 UBLCP1Q8WVY7 318 aaPredicted RBP10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 ATG4AQ8WYN0 398 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 FAM118BQ9BPY3 351 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 LHX5Q9H2C1 402 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PLEKHA5Q9HAU0 1116 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PI4K2BG5E9Z4 385 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 FSCN2O14926 492 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 PSTPIP1O43586 416 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 OPA1O60313 960 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 GNAT1P11488 350 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 KRT3P12035 628 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 CDH5P33151 784 aaPredicted RBP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 ADAM17P78536 824 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 PURAQ00577 322 aaKnown RBP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 OGDHQ02218 1023 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 SIX1Q15475 284 aaPredicted RBP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 DUPD1Q68J44 220 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 CXCL17Q6UXB2 119 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 NT5DC4Q86YG4 428 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 C12orf29Q8N999 325 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 EIF1ADQ8N9N8 165 aaKnown RBP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 TRPV1Q8NER1 839 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 BEST2Q8NFU1 509 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 ACSF2Q96CM8 615 aaPredicted RBP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 SNX27Q96L92 541 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 CPXM1Q96SM3 734 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 HERPUD2Q9BSE4 406 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 RNF39Q9H2S5 420 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 VRTNQ9H8Y1 702 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 CHST7Q9NS84 486 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 PCYOX1Q9UHG3 505 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 STRIP2Q9ULQ0 834 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 BARX2Q9UMQ3 279 aaPredicted RBP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 GABRQQ9UN88 632 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 Q9Y3F1 56 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 PODXLO00592 558 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 ERBB2P04626 1255 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 VDRP11473 427 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 RFC1P35251 1148 aaPredicted RBP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 HSD17B3P37058 310 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 HNRNPH2P55795 449 aaKnown RBP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 DHX9Q08211 1270 aaKnown RBP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZNF252P-AS1Q0IIN9 211 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 IRF5Q13568 498 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 FAM47CQ5HY64 1035 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 C3orf20Q8ND61 904 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 PIK3R5Q8WYR1 880 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 SEC14L1Q92503 715 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 LRRC45Q96CN5 670 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 CCDC114Q96M63 670 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 FMO2Q99518 471 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 MRPL45Q9BRJ2 306 aaKnown RBP10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 NT5C1AQ9BXI3 368 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 TLL2Q9Y6L7 1015 aa10.07□□□□□ -0.8
COL6A4P1-201ENST00000446690 TCRBV5S1A1TA0A578 114 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 GOLGA6CA6NDK9 693 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 DCAF8L1A6NGE4 600 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 BHMG1C9JSJ3 638 aaPredicted RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 ECEL1O95672 775 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 GOLGA6DP0CG33 693 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 KRT10P13645 584 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 ATF7P17544 494 aaPredicted RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 PSMA2P25787 234 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 HSPA9P38646 679 aaKnown RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 RPL21P46778 160 aaKnown RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 LMAN1P49257 510 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 CRYBB1P53674 252 aaPredicted RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 FCGRTP55899 365 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 TAP1Q03518 808 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms