RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 FAR2Q96K12 515 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 OXCT2Q9BYC2 517 aaPredicted RBP8.93□□□□□ -0.98
PTPN3-204ENST00000446349 CASZ1Q86V15 1759 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 TTLL13PA6NNM8 815 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PDHXO00330 501 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 PHF2O75151 1096 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 KCNA4P22459 653 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 IZUMO3Q5VZ72 239 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 SNX5Q9Y5X3 404 aa8.93□□□□□ -0.98
PTPN3-204ENST00000446349 RICTORQ6R327 1708 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 SPDYE5A6NIY4 337 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 MCF2P10911 925 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 NMT1P30419 496 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 TRIP13Q15645 432 aaPredicted RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 NAB2Q15742 525 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 SPDYE7PQ495Y7 208 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 USP38Q8NB14 1042 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 LNPEPQ9UIQ6 1025 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 M0R3G1 203 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 TRIM66O15016 1216 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 ASS1P00966 412 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 ZBTB17Q13105 803 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 FEZF2Q8TBJ5 459 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 TFB1MQ8WVM0 346 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 LATS2Q9NRM7 1088 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 FRMD3A2A2Y4 597 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 CYP26A1O43174 497 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 ARIH2O95376 493 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 KCNA2P16389 499 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 IKBKEQ14164 716 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 ADSSL1Q8N142 457 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 CSGALNACT1Q8TDX6 532 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 MRPL48Q96GC5 212 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 DNPEPQ9ULA0 475 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 ZNF263O14978 683 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 SOAT2O75908 522 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 EEF1B2P24534 225 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 TMEM86AQ8N2M4 240 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 NLNQ9BYT8 704 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 NOVA2Q9UNW9 492 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 RWDD3Q9Y3V2 267 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 CRTAMO95727 393 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 DNAJB2P25686 324 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 MAPK1P28482 360 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 PPM1AP35813 382 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 C16orf72Q14CZ0 275 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 C15orf52Q6ZUT6 534 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 PABPC5Q96DU9 382 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 IDI2Q9BXS1 227 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 COL5A2P05997 1499 aaPredicted RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 H3BRB1 525 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 POLRMTO00411 1230 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 MAP3K13O43283 966 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 FAM107AO95990 144 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 HOXA10P31260 410 aaPredicted RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 GFPT1Q06210 699 aaPredicted RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 INPP5AQ14642 412 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 CTXN3Q4LDR2 81 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 TRIM65Q6PJ69 517 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 NLRP9Q7RTR0 991 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 CNPY3Q9BT09 278 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 PLEKHA4Q9H4M7 779 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 ASB7Q9H672 318 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 TUT1Q9H6E5 874 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 SYNDIG1Q9H7V2 258 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 RRAGCQ9HB90 399 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 ABI2Q9NYB9 513 aaPredicted RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 HEATR9A2RTY3 570 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 GYG2O15488 501 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 HSPA1AP0DMV8 641 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 HSPA1BP0DMV9 641 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 UCHL3P15374 230 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 KCNA1Q09470 495 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 DPYDQ12882 1025 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 CUL2Q13617 745 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 ERAP2Q6P179 960 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 KCNQ5Q9NR82 932 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 PPARGC1AQ9UBK2 798 aaKnown RBP8.92□□□□□ -0.98
PTPN3-204ENST00000446349 RAB23Q9ULC3 237 aa8.92□□□□□ -0.98
PTPN3-204ENST00000446349 SYCE1LA8MT33 242 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 AP1G2O75843 785 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CKMP06732 381 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 POLR2LP62875 67 aaKnown RBP8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CLEC17AQ6ZS10 378 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 LZTR1Q8N653 840 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 RNPC3Q96LT9 517 aaKnown RBP8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CPVLQ9H3G5 476 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CRLS1Q9UJA2 301 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 GTPBP10A4D1E9 387 aaKnown RBP8.91□□□□□ -0.98
PTPN3-204ENST00000446349 SNAP23O00161 211 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 LZTS3O60299 673 aaPredicted RBP8.91□□□□□ -0.98
PTPN3-204ENST00000446349 PDGFRBP09619 1106 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 TMCO5AQ8N6Q1 288 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 DTX3LQ8TDB6 740 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 HEMGNQ9BXL5 484 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ING2Q9H160 280 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 XPNPEP3Q9NQH7 507 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 BCL9O00512 1426 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 C3P01024 1663 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 RSPH10B2B2RC85 870 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms