RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 C1orf220Q5T0J3 134 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 SV2AQ7L0J3 742 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 RTP3Q9BQQ7 232 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 SMOC2Q9H3U7 446 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 DDX43Q9NXZ2 648 aaKnown RBP25.68■■□□□ 1.7
C9orf3-207ENST00000445181 NXF1Q9UBU9 619 aaKnown RBP25.68■■□□□ 1.7
C9orf3-207ENST00000445181 MYO10Q9HD67 2058 aa25.67■■□□□ 1.7
C9orf3-207ENST00000445181 SEC24AO95486 1093 aa25.67■■□□□ 1.7
C9orf3-207ENST00000445181 HOXA9P31269 272 aa25.67■■□□□ 1.7
C9orf3-207ENST00000445181 GBP2P32456 591 aaPredicted RBP25.67■■□□□ 1.7
C9orf3-207ENST00000445181 PIK3CAP42336 1068 aa25.67■■□□□ 1.7
C9orf3-207ENST00000445181 LHX1P48742 406 aa25.67■■□□□ 1.7
C9orf3-207ENST00000445181 ZACNQ401N2 412 aa25.67■■□□□ 1.7
C9orf3-207ENST00000445181 DCAF17Q5H9S7 520 aaPredicted RBP25.67■■□□□ 1.7
C9orf3-207ENST00000445181 TCERG1LQ5VWI1 586 aa25.67■■□□□ 1.7
C9orf3-207ENST00000445181 DPH6Q7L8W6 267 aa25.67■■□□□ 1.7
C9orf3-207ENST00000445181 SUGP1Q8IWZ8 645 aaKnown RBP25.67■■□□□ 1.7
C9orf3-207ENST00000445181 ZC3H3Q8IXZ2 948 aaKnown RBP25.67■■□□□ 1.7
C9orf3-207ENST00000445181 TCEAL8Q8IYN2 117 aa25.67■■□□□ 1.7
C9orf3-207ENST00000445181 FBXL6Q8N531 539 aa25.67■■□□□ 1.7
C9orf3-207ENST00000445181 ZCWPW1Q9H0M4 648 aa25.67■■□□□ 1.7
C9orf3-207ENST00000445181 STX10O60499 249 aa25.66■■□□□ 1.7
C9orf3-207ENST00000445181 N4BP1O75113 896 aaKnown RBP25.66■■□□□ 1.7
C9orf3-207ENST00000445181 VNN1O95497 513 aa25.66■■□□□ 1.7
C9orf3-207ENST00000445181 STAU1O95793 577 aaKnown RBP25.66■■□□□ 1.7
C9orf3-207ENST00000445181 TTI2Q6NXR4 508 aa25.66■■□□□ 1.7
C9orf3-207ENST00000445181 DCP1BQ8IZD4 617 aaKnown RBP25.66■■□□□ 1.7
C9orf3-207ENST00000445181 SPATA18Q8TC71 538 aa25.66■■□□□ 1.7
C9orf3-207ENST00000445181 CEP63Q96MT8 703 aa25.66■■□□□ 1.7
C9orf3-207ENST00000445181 DUSP9Q99956 384 aaKnown RBP25.66■■□□□ 1.7
C9orf3-207ENST00000445181 ARMCX3Q9UH62 379 aaPredicted RBP25.66■■□□□ 1.7
C9orf3-207ENST00000445181 INSL5Q9Y5Q6 135 aa25.66■■□□□ 1.7
C9orf3-207ENST00000445181 MBD3O95983 291 aa25.65■■□□□ 1.7
C9orf3-207ENST00000445181 ACAT1P24752 427 aaKnown RBP25.65■■□□□ 1.7
C9orf3-207ENST00000445181 PPP3CAQ08209 521 aa25.65■■□□□ 1.7
C9orf3-207ENST00000445181 SGSM1Q2NKQ1 1148 aa25.65■■□□□ 1.7
C9orf3-207ENST00000445181 CCDC40Q4G0X9 1142 aa25.65■■□□□ 1.7
C9orf3-207ENST00000445181 ZNF667Q5HYK9 610 aa25.65■■□□□ 1.7
C9orf3-207ENST00000445181 MLKLQ8NB16 471 aa25.65■■□□□ 1.7
C9orf3-207ENST00000445181 ACBD6Q9BR61 282 aa25.65■■□□□ 1.7
C9orf3-207ENST00000445181 XYLT2Q9H1B5 865 aa25.65■■□□□ 1.7
C9orf3-207ENST00000445181 KCNH6Q9H252 994 aa25.65■■□□□ 1.7
C9orf3-207ENST00000445181 SNX25Q9H3E2 840 aa25.65■■□□□ 1.7
C9orf3-207ENST00000445181 MTMR11A4FU01 709 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 HLA-DRAP01903 254 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 PCSK1P29120 753 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 GTF2H1P32780 548 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 CDR1P51861 262 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 DUSP4Q13115 394 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 FOXR2Q6PJQ5 311 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 GRASPQ7Z6J2 395 aaPredicted RBP25.64■■□□□ 1.7
C9orf3-207ENST00000445181 FILIP1Q7Z7B0 1213 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 OSTM1Q86WC4 334 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 ELMOD1Q8N336 334 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 ATAD1Q8NBU5 361 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 MYADMQ96S97 322 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 IMPG2Q9BZV3 1241 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 TMEM8AQ9HCN3 771 aa25.64■■□□□ 1.7
C9orf3-207ENST00000445181 P4HA1P13674 534 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 TWF1Q12792 350 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 SMARCB1Q12824 385 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 KRT39Q6A163 491 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 SCARA5Q6ZMJ2 495 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 CCDC150Q8NCX0 1101 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 KBTBD7Q8WVZ9 684 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 TAF4BQ92750 862 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 ELMO3Q96BJ8 720 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 KCNK12Q9HB15 430 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 METTL14Q9HCE5 456 aaKnown RBP25.63■■□□□ 1.69
C9orf3-207ENST00000445181 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.63■■□□□ 1.695e-17■■■■■ 409.9
C9orf3-207ENST00000445181 RWDD2AQ9UIY3 292 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 SLC27A5Q9Y2P5 690 aa25.63■■□□□ 1.69
C9orf3-207ENST00000445181 GABRDO14764 452 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 FGFR1OPO95684 399 aaKnown RBP25.62■■□□□ 1.69
C9orf3-207ENST00000445181 PDGFBP01127 241 aaPredicted RBP25.62■■□□□ 1.69
C9orf3-207ENST00000445181 POU2F2P09086 479 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 WARSP23381 471 aaKnown RBP25.62■■□□□ 1.69
C9orf3-207ENST00000445181 MXI1P50539 228 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 TDGQ13569 410 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 INTS6LQ5JSJ4 861 aaKnown RBP25.62■■□□□ 1.69
C9orf3-207ENST00000445181 LIMS2Q7Z4I7 341 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 FRMD5Q7Z6J6 570 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 LRRTM3Q86VH5 581 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 OR6B3Q8NGW1 331 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 TAS1R2Q8TE23 839 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 C2orf15Q8WU43 125 aaKnown RBP25.62■■□□□ 1.69
C9orf3-207ENST00000445181 SEPT5Q99719 369 aaPredicted RBP25.62■■□□□ 1.69
C9orf3-207ENST00000445181 MRPL45Q9BRJ2 306 aaKnown RBP25.62■■□□□ 1.69
C9orf3-207ENST00000445181 VRTNQ9H8Y1 702 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 ABI2Q9NYB9 513 aaPredicted RBP25.62■■□□□ 1.69
C9orf3-207ENST00000445181 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.62■■□□□ 1.69
C9orf3-207ENST00000445181 IGSF9Q9P2J2 1179 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 EPS15L1Q9UBC2 864 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 DACH1Q9UI36 760 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 YIPF1Q9Y548 306 aa25.62■■□□□ 1.69
C9orf3-207ENST00000445181 HCRTO43612 131 aa25.61■■□□□ 1.69
C9orf3-207ENST00000445181 TACC1O75410 805 aa25.61■■□□□ 1.69
C9orf3-207ENST00000445181 VNN2O95498 520 aa25.61■■□□□ 1.69
C9orf3-207ENST00000445181 PDGFRBP09619 1106 aa25.61■■□□□ 1.69
C9orf3-207ENST00000445181 GNL1P36915 607 aaPredicted RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms