RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 ZCWPW1Q9H0M4 648 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 FAM124BQ9H5Z6 455 aaPredicted RBP13.12□□□□□ -0.31
LTBR-204ENST00000444814 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.12□□□□□ -0.31
LTBR-204ENST00000444814 NXF1Q9UBU9 619 aaKnown RBP13.12□□□□□ -0.31
LTBR-204ENST00000444814 PCDHB5Q9Y5E4 795 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 PTPRJQ12913 1337 aa13.12□□□□□ -0.31
LTBR-204ENST00000444814 PAPLNO95428 1278 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 PTPN2P17706 415 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 NLRP12P59046 1061 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 MYL6P60660 151 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 RPL10AP62906 217 aaKnown RBP13.11□□□□□ -0.31
LTBR-204ENST00000444814 CYP4A22Q5TCH4 519 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 TTI2Q6NXR4 508 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 GJD3Q8N144 294 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 C12orf76Q8N812 135 aaPredicted RBP13.11□□□□□ -0.31
LTBR-204ENST00000444814 FBXL13Q8NEE6 735 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 OR6B3Q8NGW1 331 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 CYP3A43Q9HB55 503 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 WDR6Q9NNW5 1121 aaKnown RBP13.11□□□□□ -0.31
LTBR-204ENST00000444814 ABCB6Q9NP58 842 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 L1RE1Q9UN81 338 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 INSL5Q9Y5Q6 135 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 CLUHO75153 1309 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 P4HA2O15460 535 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 ADAM12O43184 909 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 LETM1O95202 739 aaPredicted RBP13.11□□□□□ -0.31
LTBR-204ENST00000444814 CST3P01034 146 aaPredicted RBP13.11□□□□□ -0.31
LTBR-204ENST00000444814 HLA-DRAP01903 254 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 TPM2P07951 284 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 GNL1P36915 607 aaPredicted RBP13.11□□□□□ -0.31
LTBR-204ENST00000444814 GCLMP48507 274 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 ZP2Q05996 745 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 SOWAHAQ2M3V2 549 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 SLC39A12Q504Y0 691 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 INTS6LQ5JSJ4 861 aaKnown RBP13.11□□□□□ -0.31
LTBR-204ENST00000444814 SPATA2LQ8IUW3 424 aaPredicted RBP13.11□□□□□ -0.31
LTBR-204ENST00000444814 CXorf38Q8TB03 319 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 FAM200AQ8TCP9 573 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 ZNF516Q92618 1163 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 FUBP3Q96I24 572 aaKnown RBP eCLIP13.11□□□□□ -0.31
LTBR-204ENST00000444814 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 MMRN2Q9H8L6 949 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 ANO10Q9NW15 660 aa13.11□□□□□ -0.31
LTBR-204ENST00000444814 ATG2AQ2TAZ0 1938 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 TRIM49BA6NDI0 452 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 TNFRSF10AO00220 468 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 GABRDO14764 452 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 CCL16O15467 120 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 RFPL2O75678 378 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 TRIM49P0CI25 452 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 TRIM49CP0CI26 452 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 FSHRP23945 695 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 IGFBP6P24592 240 aaPredicted RBP13.1□□□□□ -0.31
LTBR-204ENST00000444814 MCCD1P59942 119 aaPredicted RBP13.1□□□□□ -0.31
LTBR-204ENST00000444814 DLG4P78352 724 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 MGAT5BQ3V5L5 792 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 PABPC1LQ4VXU2 614 aaKnown RBP13.1□□□□□ -0.31
LTBR-204ENST00000444814 RSPO2Q6UXX9 243 aaPredicted RBP13.1□□□□□ -0.31
LTBR-204ENST00000444814 RNF19BQ6ZMZ0 732 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 CNPY4Q8N129 248 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 GCNAQ96QF7 691 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 SYT15Q9BQS2 421 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 SRRTQ9BXP5 876 aaKnown RBP13.1□□□□□ -0.31
LTBR-204ENST00000444814 NAT10Q9H0A0 1025 aaKnown RBP13.1□□□□□ -0.31
LTBR-204ENST00000444814 ASAH2Q9NR71 780 aa13.1□□□□□ -0.31
LTBR-204ENST00000444814 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.1□□□□□ -0.31
LTBR-204ENST00000444814 MYO7AQ13402 2215 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 ANK1P16157 1881 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 MTMR11A4FU01 709 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 A8MXQ7 604 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 ASS1P00966 412 aaKnown RBP13.09□□□□□ -0.31
LTBR-204ENST00000444814 ALADP13716 330 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 ANXA13P27216 316 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 GBP2P32456 591 aaPredicted RBP13.09□□□□□ -0.31
LTBR-204ENST00000444814 PMS1P54277 932 aaKnown RBP13.09□□□□□ -0.31
LTBR-204ENST00000444814 STX17P56962 302 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 NOP14P78316 857 aaKnown RBP13.09□□□□□ -0.31
LTBR-204ENST00000444814 TWF1Q12792 350 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 PDZD4Q76G19 769 aaPredicted RBP13.09□□□□□ -0.31
LTBR-204ENST00000444814 UNC93AQ86WB7 457 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 ANKRD20A12PQ8NF67 263 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 OR10T2Q8NGX3 314 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 PLEKHO2Q8TD55 490 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 NXPE3Q969Y0 559 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 FAM81BQ96LP2 452 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 PGLYRP2Q96PD5 576 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 SEPT5Q99719 369 aaPredicted RBP13.09□□□□□ -0.31
LTBR-204ENST00000444814 NIF3L1Q9GZT8 377 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 GZF1Q9H116 711 aaPredicted RBP13.09□□□□□ -0.31
LTBR-204ENST00000444814 POMKQ9H5K3 350 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 AVENQ9NQS1 362 aaPredicted RBP13.09□□□□□ -0.31
LTBR-204ENST00000444814 RAB20Q9NX57 234 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 ABI2Q9NYB9 513 aaPredicted RBP13.09□□□□□ -0.31
LTBR-204ENST00000444814 ZMYM5Q9UJ78 669 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 YIPF1Q9Y548 306 aa13.09□□□□□ -0.31
LTBR-204ENST00000444814 LAMA2P24043 3122 aaKnown RBP13.08□□□□□ -0.32
LTBR-204ENST00000444814 DLL1O00548 723 aa13.08□□□□□ -0.32
LTBR-204ENST00000444814 PMM2O15305 246 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms