RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 UNC93AQ86WB7 457 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 ADGRF2Q8IZF7 708 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 TOP6BLQ8N6T0 577 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 TMEM35BQ8NCS4 154 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 DDX27Q96GQ7 796 aaKnown RBP10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 ZSWIM1Q9BR11 485 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 OSGEPQ9NPF4 335 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 GTF3C4Q9UKN8 822 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 KIAA1257Q9ULG3 409 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 LRFN2Q9ULH4 789 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 PCDHGC3Q9UN70 934 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 L1RE1Q9UN81 338 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 PCDHB7Q9Y5E2 793 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 PCDHGC5Q9Y5F6 944 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 GRID2IPA4D2P6 1211 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 CYB561D2O14569 222 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 ATP1A1P05023 1023 aaKnown RBP10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 MYBL1P10243 752 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 GNL1P36915 607 aaPredicted RBP10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 DSTYKQ6XUX3 929 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 ACOT1Q86TX2 421 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 PDCL2Q8N4E4 241 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 C1orf131Q8NDD1 294 aaKnown RBP10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 C3orf58Q8NDZ4 430 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 KBTBD7Q8WVZ9 684 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 UROC1Q96N76 676 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 PAAF1Q9BRP4 392 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 C11orf70Q9BRQ4 267 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 ADAM22Q9P0K1 906 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 KANSL3Q9P2N6 904 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 CHORDC1Q9UHD1 332 aaPredicted RBP10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 TTC3P53804 2025 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 M0QYV0 167 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 INPPL1O15357 1258 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 CXCL10P02778 98 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 PDGFRBP09619 1106 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 PAN2Q504Q3 1202 aaKnown RBP10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 LIN9Q5TKA1 542 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 MMS22LQ6ZRQ5 1243 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 MON1BQ7L1V2 547 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 DAAM2Q86T65 1068 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 PHF13Q86YI8 300 aaPredicted RBP10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 MCOLN2Q8IZK6 566 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 C12orf29Q8N999 325 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 TPCN2Q8NHX9 752 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 SENP8Q96LD8 212 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 FAM193BQ96PV7 902 aaPredicted RBP10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 NUP85Q9BW27 656 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 ZNF518BQ9C0D4 1074 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 ELAC1Q9H777 363 aaKnown RBP10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 PRDM5Q9NQX1 630 aaPredicted RBP10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 CNOT8Q9UFF9 292 aaKnown RBP10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 STXBP5LQ9Y2K9 1186 aa10.09□□□□□ -0.79
SMPD4P1-203ENST00000443839 O00370 1275 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 MICAL2O94851 1124 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 FTCDO95954 541 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 CAPN2P17655 700 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 RRM1P23921 792 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 IGFBP6P24592 240 aaPredicted RBP10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 CNGA2Q16280 664 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 C2CD6Q53TS8 623 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 WSCD1Q658N2 575 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 DENND1BQ6P3S1 775 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 SYCE1Q8N0S2 351 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 HASPINQ8TF76 798 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 ANKRD7Q92527 254 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 VCPIP1Q96JH7 1222 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 CALR3Q96L12 384 aaKnown RBP10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 LHX5Q9H2C1 402 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 L2HGDHQ9H9P8 463 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 FAM49BQ9NUQ9 324 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 TBC1D13Q9NVG8 400 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 UVRAGQ9P2Y5 699 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 COG5Q9UP83 839 aa10.08□□□□□ -0.8
SMPD4P1-203ENST00000443839 HOXA2O43364 376 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 BUB1BO60566 1050 aaPredicted RBP10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 CYP1A2P05177 515 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 CALB1P05937 261 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 MMP8P22894 467 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 WARSP23381 471 aaKnown RBP10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 LMO2P25791 158 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 CDH5P33151 784 aaPredicted RBP10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 IKBKEQ14164 716 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 STILQ15468 1287 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 TCTN1Q2MV58 587 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 GOLGA7BQ2TAP0 167 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 LCLAT1Q6UWP7 414 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 LIMS2Q7Z4I7 341 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 PHLDB2Q86SQ0 1253 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 ERICH1Q86X53 443 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 LRRC57Q8N9N7 239 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 MSANTD4Q8NCY6 345 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 ZNF564Q8TBZ8 553 aaPredicted RBP10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 TNIP3Q96KP6 325 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 GOLPH3Q9H4A6 298 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 DPEP3Q9H4B8 488 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 SYNCQ9H7C4 482 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 HESX1Q9UBX0 185 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 TSPAN16Q9UKR8 245 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms