RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 O00370 1275 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 DNM1LO00429 736 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 DPYSL4O14531 572 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 KCNK3O14649 394 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PPP1R12AO14974 1030 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 MDM4O15151 490 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 DDX3YO15523 660 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 TREHO43280 583 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ADCY6O43306 1168 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 TRAPPC3O43617 180 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 SPOPO43791 374 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 HUS1O60921 280 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 EFCAB14O75071 495 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PHF2O75151 1096 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 LRRN2O75325 713 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 RNF8O76064 485 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 RECQL4O94761 1208 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 TJP3O95049 919 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 NPTXRO95502 500 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 GAS8O95995 478 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ABL1P00519 1130 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 VTNP04004 478 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ITGB3P05106 788 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 EDN1P05305 212 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 THP07101 528 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ASGR1P07306 291 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 MMEP08473 750 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 MYL3P08590 195 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 C6orf222P0C671 652 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ZNF286BP0CG31 522 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CXCL8P10145 99 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 KRT3P12035 628 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 KRT5P13647 590 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ZFXP17010 805 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ITIH2P19823 946 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 TYMPP19971 482 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CYP2B6P20813 491 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 WARSP23381 471 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PCSK1P29120 753 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 STIP1P31948 543 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CYP2C18P33260 490 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 RFC2P35250 354 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 TNFSF9P41273 254 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PTPN9P43378 593 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PLA2G4AP47712 749 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 NR2C2P49116 596 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CDK7P50613 346 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ZNF143P52747 638 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ACLYP53396 1101 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 RAD23BP54727 409 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 EIF3BP55884 814 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 LILRA4P59901 499 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 MYL6P60660 151 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 TFAMQ00059 246 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ARID5AQ03989 594 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ZNF33AQ06730 810 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ILF2Q12905 390 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ELAVL2Q12926 359 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 GRIK3Q13003 919 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 KLF1Q13351 362 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 MTMR3Q13615 1198 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ITGA7Q13683 1181 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 DSC3Q14574 896 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PDK2Q15119 407 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 RASA2Q15283 850 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PTPN21Q16825 1174 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 HADHQ16836 314 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 KIZQ2M2Z5 673 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 NBPF20Q3BBV1 942 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 BEND6Q5SZJ8 279 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 UBXN11Q5T124 520 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CFAP58Q5T655 872 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 SEL1L2Q5TEA6 688 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 C9orf57Q5W0N0 161 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 EEF1DP3Q658K8 133 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 LHX8Q68G74 356 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 JADE1Q6IE81 842 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 C8orf74Q6P047 294 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CC2D1AQ6P1N0 951 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 GJB7Q6PEY0 223 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 SLC24A5Q71RS6 500 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 RTL10Q7L3V2 364 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 SLC26A9Q7LBE3 791 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ANKRD33Q7Z3H0 272 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 PCGF5Q86SE9 256 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 FAM228AQ86W67 206 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CCDC89Q8N998 374 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ANKRD52Q8NB46 1076 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 SLC4A11Q8NBS3 891 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 ZSWIM2Q8NEG5 633 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 TRPV1Q8NER1 839 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 APPL2Q8NEU8 664 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 CMASQ8NFW8 434 aaPredicted RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 IPO4Q8TEX9 1081 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 COG1Q8WTW3 980 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 C2orf15Q8WU43 125 aaKnown RBP2.99□□□□□ -1.93
LINC00393-201ENST00000443621 TEKT4Q8WW24 435 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 DNAJB3Q8WWF6 145 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 IRGQQ8WZA9 623 aa2.99□□□□□ -1.93
LINC00393-201ENST00000443621 NKD2Q969F2 451 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms