RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 BRD2P25440 801 aaKnown RBP16.91■□□□□ 0.3
MCF2L-217ENST00000441756 BRCC3P46736 316 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 SLC11A1P49279 550 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 BCAR1P56945 870 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 KIF5AQ12840 1032 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 SPOUT1Q5T280 376 aaKnown RBP16.91■□□□□ 0.3
MCF2L-217ENST00000441756 C16orf59Q7L2K0 433 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 CRYBG2Q8N1P7 616 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 MSANTD4Q8NCY6 345 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 LNX1Q8TBB1 728 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-217ENST00000441756 HASPINQ8TF76 798 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 ZNF606Q8WXB4 792 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 RABGGTAQ92696 567 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 TRIM11Q96F44 468 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 ZNF558Q96NG5 402 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 ZBED2Q9BTP6 218 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 ZNF518BQ9C0D4 1074 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 RC3H2Q9HBD1 1191 aaKnown RBP16.91■□□□□ 0.3
MCF2L-217ENST00000441756 AAASQ9NRG9 546 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 HMGXB4Q9UGU5 601 aa16.91■□□□□ 0.3
MCF2L-217ENST00000441756 DNAH12Q6ZR08 3092 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 RTN2O75298 545 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 GJB5O95377 273 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 GALTP07902 379 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 H2AFZP0C0S5 128 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 CYP27A1Q02318 531 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 CNGA2Q16280 664 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 CLEC16AQ2KHT3 1053 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 OVOS1Q6IE37 1185 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 FAM117BQ6P1L5 589 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 ZNF662Q6ZS27 426 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 H2AFVQ71UI9 128 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 ACOT1Q86TX2 421 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 TMEM35BQ8NCS4 154 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 PPP1R13BQ96KQ4 1090 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 TWNKQ96RR1 684 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 ACP6Q9NPH0 428 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 DDX43Q9NXZ2 648 aaKnown RBP16.9■□□□□ 0.3
MCF2L-217ENST00000441756 HESX1Q9UBX0 185 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 STK39Q9UEW8 545 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 CDH9Q9ULB4 789 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 INSL6Q9Y581 213 aa16.9■□□□□ 0.3
MCF2L-217ENST00000441756 TSC2P49815 1807 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 COL4A6Q14031 1691 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 ZNF263O14978 683 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 PPM1AP35813 382 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 NSFP46459 744 aaKnown RBP16.89■□□□□ 0.29
MCF2L-217ENST00000441756 YWHAHQ04917 246 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-217ENST00000441756 MAPRE1Q15691 268 aaKnown RBP16.89■□□□□ 0.29
MCF2L-217ENST00000441756 ARHGAP17Q68EM7 881 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 FUT10Q6P4F1 479 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 CD300LGQ6UXG3 332 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 B3GALNT2Q8NCR0 500 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 OLIG1Q8TAK6 271 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 CTNNBL1Q8WYA6 563 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-217ENST00000441756 NOX5Q96PH1 765 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 SYT15Q9BQS2 421 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 OXCT2Q9BYC2 517 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-217ENST00000441756 LHX5Q9H2C1 402 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 CWH43Q9H720 699 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 TRMT1Q9NXH9 659 aaKnown RBP16.89■□□□□ 0.29
MCF2L-217ENST00000441756 NENFQ9UMX5 172 aa16.89■□□□□ 0.29
MCF2L-217ENST00000441756 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.89■□□□□ 0.29
MCF2L-217ENST00000441756 REXO2Q9Y3B8 237 aaKnown RBP16.89■□□□□ 0.29
MCF2L-217ENST00000441756 I3L4J1 428 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 O00370 1275 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 ZNF500O60304 480 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-217ENST00000441756 CYP1A1P04798 512 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-217ENST00000441756 ITGB1P05556 798 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 PDGFRBP09619 1106 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 SETSIPP0DME0 302 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 ATP2A2P16615 1042 aaKnown RBP16.88■□□□□ 0.29
MCF2L-217ENST00000441756 EPHB4P54760 987 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 SLC8A3P57103 927 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 HTRA4P83105 476 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-217ENST00000441756 TSPY1Q01534 308 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 CENPCQ03188 943 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 ORC1Q13415 861 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 ACAD10Q6JQN1 1059 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 LCLAT1Q6UWP7 414 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-217ENST00000441756 OSTM1Q86WC4 334 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 HERC6Q8IVU3 1022 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 FIBCD1Q8N539 461 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 TFAP2BQ92481 460 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 ACBD6Q9BR61 282 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 ISCUQ9H1K1 167 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 MARCH5Q9NX47 278 aa16.88■□□□□ 0.29
MCF2L-217ENST00000441756 ANKRD62A6NC57 917 aa16.87■□□□□ 0.29
MCF2L-217ENST00000441756 H7C4K7 107 aa16.87■□□□□ 0.29
MCF2L-217ENST00000441756 M0QYV0 167 aa16.87■□□□□ 0.29
MCF2L-217ENST00000441756 KIF2AO00139 706 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-217ENST00000441756 PJA2O43164 708 aa16.87■□□□□ 0.29
MCF2L-217ENST00000441756 TUBB4AP04350 444 aa16.87■□□□□ 0.29
MCF2L-217ENST00000441756 TMEM253P0C7T8 217 aa16.87■□□□□ 0.29
MCF2L-217ENST00000441756 MYBL1P10243 752 aa16.87■□□□□ 0.29
MCF2L-217ENST00000441756 PTPN1P18031 435 aaKnown RBP16.87■□□□□ 0.29
MCF2L-217ENST00000441756 CDH5P33151 784 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-217ENST00000441756 SNX16P57768 344 aa16.87■□□□□ 0.29
MCF2L-217ENST00000441756 NOMO3P69849 1222 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 331.3 ms