RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 HABP2Q14520 560 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 ZNF827Q17R98 1081 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 AAK1Q2M2I8 961 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 CWF19L1Q69YN2 538 aaKnown RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 NEPROQ6NW34 567 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 CAVIN1Q6NZI2 390 aaKnown RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 RHOUQ7L0Q8 258 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 FAM149B1Q96BN6 582 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 NUSAP1Q9BXS6 441 aaKnown RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 KCND1Q9NSA2 647 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 ADD3Q9UEY8 706 aaKnown RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 TRPS1Q9UHF7 1281 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 ANGPTL2Q9UKU9 493 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 N4BP2Q86UW6 1770 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 ZNF536O15090 1300 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 TOGARAM1Q9Y4F4 1720 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 PSMD14O00487 310 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 LTFP02788 710 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 FESP07332 822 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 GLI1P08151 1106 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 TLX1P31314 330 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-206ENST00000441438 KRT2P35908 639 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 TFCP2Q12800 502 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 CYLC2Q14093 348 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-206ENST00000441438 ZNF267Q14586 743 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-206ENST00000441438 TUBA3EQ6PEY2 450 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 RBM42Q9BTD8 480 aaKnown RBP11.13□□□□□ -0.63
SYNE2-206ENST00000441438 SLC39A1Q9NY26 324 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 ACTR10Q9NZ32 417 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 SLC39A10Q9ULF5 831 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 SCAF8Q9UPN6 1271 aaKnown RBP11.13□□□□□ -0.63
SYNE2-206ENST00000441438 PCDHB6Q9Y5E3 794 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 TAF1LQ8IZX4 1826 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 PROM1O43490 865 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 CCNT1O60563 726 aaKnown RBP11.13□□□□□ -0.63
SYNE2-206ENST00000441438 SRGAP2BP0DMP2 458 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 C6P13671 934 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 CCR1P32246 355 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 GCLCP48506 637 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-206ENST00000441438 KRT85P78386 507 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 GRTP1Q5TC63 336 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 PTF1AQ7RTS3 328 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 CNTROBQ8N137 903 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 ARL14Q8N4G2 192 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 SIMC1Q8NDZ2 872 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 DNAJB8Q8NHS0 232 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 SH3RF3Q8TEJ3 882 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-206ENST00000441438 SYN2Q92777 582 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-206ENST00000441438 LTV1Q96GA3 475 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-206ENST00000441438 TAAR9Q96RI9 348 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 TXN2Q99757 166 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 C1orf21Q9H246 121 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 TFB2MQ9H5Q4 396 aaKnown RBP11.13□□□□□ -0.63
SYNE2-206ENST00000441438 ADPRHL2Q9NX46 363 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 TAS2R3Q9NYW6 316 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 PCDHB9Q9Y5E1 797 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 GMEB1Q9Y692 573 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 RGPD2P0DJD1 1756 aa11.13□□□□□ -0.63
SYNE2-206ENST00000441438 SMAD6O43541 496 aaKnown RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 LRRN2O75325 713 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 ACSL1P33121 698 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 GJA5P36382 358 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 PTGER2P43116 358 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 POU3F4P49335 361 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 ACTR1AP61163 376 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 PRKCZQ05513 592 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 PLD1Q13393 1074 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 ORC1Q13415 861 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 ZCCHC12Q6PEW1 402 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 ZNF574Q6ZN55 896 aaPredicted RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 ERO1BQ86YB8 467 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 FUBP3Q96I24 572 aaKnown RBP eCLIP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 MNTQ99583 582 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 SAP130Q9H0E3 1048 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 HAUS4Q9H6D7 363 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 LRRC4BQ9NT99 713 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 MBD2Q9UBB5 411 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 MBD1Q9UIS9 605 aaPredicted RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 ITGB4P16144 1822 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 PMS2P1A4D2B8 440 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 TRIM43BA6NCK2 446 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 GOLGA8BA8MQT2 603 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 SLC25A17O43808 307 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 MBD3O95983 291 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 EEF1GP26641 437 aaKnown RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 HOXA6P31267 233 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 EIF4A3P38919 411 aaKnown RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 CCNFP41002 786 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 LIPEQ05469 1076 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 MOGQ16653 247 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 IFIT1BQ5T764 474 aaKnown RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 BEND4Q6ZU67 534 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 SYCP3Q8IZU3 236 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 ANKS1AQ92625 1134 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 TRIM43Q96BQ3 446 aaPredicted RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 HINFPQ9BQA5 517 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 TRIM62Q9BVG3 475 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms