RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 SPEM1Q8N4L4 309 aa12.54□□□□□ -0.4
UBE2D4-204ENST00000440899 CACTINQ8WUQ7 758 aaKnown RBP12.54□□□□□ -0.4
UBE2D4-204ENST00000440899 ZNF560Q96MR9 790 aa12.54□□□□□ -0.4
UBE2D4-204ENST00000440899 LRRC3BQ96PB8 259 aa12.54□□□□□ -0.4
UBE2D4-204ENST00000440899 GCNAQ96QF7 691 aa12.54□□□□□ -0.4
UBE2D4-204ENST00000440899 LPIN3Q9BQK8 851 aa12.54□□□□□ -0.4
UBE2D4-204ENST00000440899 FAM213AQ9BRX8 229 aa12.54□□□□□ -0.4
UBE2D4-204ENST00000440899 OLFML3Q9NRN5 406 aa12.54□□□□□ -0.4
UBE2D4-204ENST00000440899 TBC1D7Q9P0N9 293 aa12.54□□□□□ -0.4
UBE2D4-204ENST00000440899 PCDHB5Q9Y5E4 795 aa12.54□□□□□ -0.4
UBE2D4-204ENST00000440899 MORC2Q9Y6X9 1032 aaPredicted RBP12.54□□□□□ -0.4
UBE2D4-204ENST00000440899 MYBPHLA2RUH7 354 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 SLC38A8A6NNN8 435 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 SPECC1L-ADORA2AF8WAN1 911 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 GCNT3O95395 438 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 PRAMEF12O95522 483 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 HAPLN1P10915 354 aaPredicted RBP12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 IDEP14735 1019 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 ATF6P18850 670 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 GARTP22102 1010 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 SOX9P48436 509 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 CDR1P51861 262 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 TFAMQ00059 246 aaKnown RBP12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 TSPY1Q01534 308 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 CEBPZQ03701 1054 aaKnown RBP12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 ALCAMQ13740 583 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 SLC39A14Q15043 492 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 NFE2Q16621 373 aaPredicted RBP12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 FAM173BQ6P4H8 233 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 DGLUCYQ7Z3D6 616 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 BRSK2Q8IWQ3 736 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 SYCP3Q8IZU3 236 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 CELF5Q8N6W0 485 aaKnown RBP12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 BPIFB1Q8TDL5 484 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 GIPC2Q8TF65 315 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 IL21Q9HBE4 155 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 THG1LQ9NWX6 298 aaKnown RBP12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 ABI2Q9NYB9 513 aaPredicted RBP12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 DLL3Q9NYJ7 618 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 RAB23Q9ULC3 237 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 AGAP1Q9UPQ3 857 aa12.53□□□□□ -0.4
UBE2D4-204ENST00000440899 SCN1AP35498 2009 aa12.52□□□□□ -0.4
UBE2D4-204ENST00000440899 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 TULP1O00294 542 aaPredicted RBP12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 HUS1O60921 280 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 SDHBP21912 280 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 CTHP32929 405 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 STAT6P42226 847 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 CYP4F8P98187 520 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 GAS6Q14393 721 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 DGKKQ5KSL6 1271 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 CMTM8Q8IZV2 173 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 TMEM86AQ8N2M4 240 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 LRRC52Q8N7C0 313 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 C1orf127Q8N9H9 656 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 ZSWIM2Q8NEG5 633 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 SAAL1Q96ER3 474 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 INTS4Q96HW7 963 aaKnown RBP12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 ZFYVE19Q96K21 471 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 ACBD6Q9BR61 282 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 SLC46A2Q9BY10 475 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 PANK2Q9BZ23 570 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 ZSCAN16Q9H4T2 348 aaPredicted RBP12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 PANK4Q9NVE7 773 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 RBAKQ9NYW8 714 aaPredicted RBP12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 GTSE1Q9NYZ3 720 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 TICRRQ7Z2Z1 1910 aa12.52□□□□□ -0.41
UBE2D4-204ENST00000440899 COL4A2P08572 1712 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 SOBPA7XYQ1 873 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 EXTL3O43909 919 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 PAPSS2O95340 614 aaPredicted RBP12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 F11P03951 625 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 ITGB3P05106 788 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 CSH1P0DML2 217 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 CSH2P0DML3 217 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 HMGA1P17096 107 aaKnown RBP12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 DDX6P26196 483 aaKnown RBP eCLIP12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 AVPR1AP37288 418 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 CASP5P51878 434 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 WNT7BP56706 349 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 NLRP12P59046 1061 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 RBP5P82980 135 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 SATB1Q01826 763 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 RSPO4Q2I0M5 234 aaPredicted RBP12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 ITPRIPL2Q3MIP1 535 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 TXNDC11Q6PKC3 985 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 CCDC65Q8IXS2 484 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 SYNPOQ8N3V7 929 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 PDCL2Q8N4E4 241 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 CSGALNACT2Q8N6G5 542 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 TTC8Q8TAM2 541 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 SPATA18Q8TC71 538 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 USP28Q96RU2 1077 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 PI4K2AQ9BTU6 479 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 TMEM206Q9H813 350 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 ABCB6Q9NP58 842 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 GKN1Q9NS71 199 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 RBM12Q9NTZ6 932 aaKnown RBP12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 TMLHEQ9NVH6 421 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms