RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 DNAH14Q0VDD8 3507 aa9.71□□□□□ -0.85
HDAC6-209ENST00000440653 GOLGA6L10A6NI86 522 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 SLC15A5A6NIM6 579 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 PODXLO00592 558 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 ZMYND10O75800 440 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 PGK1P00558 417 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 FGBP02675 491 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 GLI1P08151 1106 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 P4HA1P13674 534 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 COMTP21964 271 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 NOMO3P69849 1222 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 CDC42EP1Q00587 391 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 SLC7A5Q01650 507 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 DR1Q01658 176 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 MBTD1Q05BQ5 628 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 TRPC3Q13507 836 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 COL9A2Q14055 689 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-209ENST00000440653 GRB14Q14449 540 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 HLTFQ14527 1009 aaKnown RBP eCLIP9.71□□□□□ -0.86
HDAC6-209ENST00000440653 TMEM132AQ24JP5 1023 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 SGSM1Q2NKQ1 1148 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 ZNF699Q32M78 642 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 SYDE1Q6ZW31 735 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-209ENST00000440653 SPRED2Q7Z698 418 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 CROCCP2Q86T23 111 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 ZNF410Q86VK4 478 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 TRIM50Q86XT4 487 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 RHPN2Q8IUC4 686 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 LINC01465Q8N7H1 131 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 HDAC7Q8WUI4 952 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 CASKIN2Q8WXE0 1202 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 ARNTL2Q8WYA1 636 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 ZNF516Q92618 1163 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 SLCO2A1Q92959 643 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 TATDN2Q93075 761 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 NLRP4Q96MN2 994 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 TOX2Q96NM4 488 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 TCHPQ9BT92 498 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 HAPLN2Q9GZV7 340 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 DDX47Q9H0S4 455 aaKnown RBP9.71□□□□□ -0.86
HDAC6-209ENST00000440653 ST7Q9NRC1 585 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 HOMER3Q9NSC5 361 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 PCYOX1Q9UHG3 505 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 ANAPC7Q9UJX3 599 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 STRIP2Q9ULQ0 834 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 PCDHB4Q9Y5E5 795 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 PCDHA3Q9Y5H8 950 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 PCDHA11Q9Y5I1 949 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 TECTAO75443 2155 aa9.71□□□□□ -0.86
HDAC6-209ENST00000440653 RIF1Q5UIP0 2472 aaKnown RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 GOLGA6CA6NDK9 693 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 INO80B-WBP1J3KQ70 363 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 NDC80O14777 642 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 POLR3GO15318 223 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 MED7O43513 233 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 LPXNO60711 386 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 EDN1P05305 212 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 CA3P07451 260 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 GOLGA6DP0CG33 693 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 HARSP12081 509 aaKnown RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 ATICP31939 592 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 CDH5P33151 784 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 CYP2C18P33260 490 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 CETN2P41208 172 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 DRG2P55039 364 aaKnown RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 GSCP56915 257 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 MKRN4PQ13434 485 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 MESDQ14696 234 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 DCAF4L1Q3SXM0 396 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 LMBRD2Q68DH5 695 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 TMEM270Q6UE05 265 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 LRRC71Q8N4P6 559 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 TMEM199Q8N511 208 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 TMEM35BQ8NCS4 154 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 FAM76AQ8TAV0 307 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 GRK7Q8WTQ7 553 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 ALG3Q92685 438 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 PI4K2AQ9BTU6 479 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 INO80BQ9C086 356 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 MTMR12Q9C0I1 747 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 CDT1Q9H211 546 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 ASB7Q9H672 318 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 UBE2ZQ9H832 354 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 FAM204AQ9H8W3 233 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 VRTNQ9H8Y1 702 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 RPF1Q9H9Y2 349 aaKnown RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 APOBEC3GQ9HC16 384 aaKnown RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 PTPRHQ9HD43 1115 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 IL23AQ9NPF7 189 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-209ENST00000440653 GOLGA6AQ9NYA3 693 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 NFU1Q9UMS0 254 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 PCDHGC3Q9UN70 934 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 FAN1Q9Y2M0 1017 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 VPS13AQ96RL7 3174 aa9.7□□□□□ -0.86
HDAC6-209ENST00000440653 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 TMEM110-MUSTN1A8MSY1 372 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 MYO1FO00160 1098 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 ATMINO43313 823 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 THAP12O43422 761 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms