RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CAPN6Q9Y6Q1 641 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 H3BQF6 201 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 CLDN3O15551 220 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 EFCAB14O75071 495 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 PPP1R37O75864 691 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 CXCL14O95715 111 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 ABL1P00519 1130 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 TMEM253P0C7T8 217 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 PON1P27169 355 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 SLC11A1P49279 550 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 POLR2FP61218 127 aaKnown RBP5.08□□□□□ -1.6
EDEM3-203ENST00000439962 CETN1Q12798 172 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 MTMR3Q13615 1198 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 TDRD12Q587J7 1177 aaKnown RBP5.08□□□□□ -1.6
EDEM3-203ENST00000439962 C8orf74Q6P047 294 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 PRSS55Q6UWB4 352 aaPredicted RBP5.08□□□□□ -1.6
EDEM3-203ENST00000439962 HS2ST1Q7LGA3 356 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 HAUS6Q7Z4H7 955 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 ZNF410Q86VK4 478 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 SEC14L1Q92503 715 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 SLC35C1Q96A29 364 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 LARSQ9P2J5 1176 aaKnown RBP5.08□□□□□ -1.6
EDEM3-203ENST00000439962 TRIM10Q9UDY6 481 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 GGA2Q9UJY4 613 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 ZMYM2Q9UBW7 1377 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 MACROD2A1Z1Q3 448 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 GOLGA6BA6NDN3 693 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 H0YCG3 227 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 TULP2O00295 520 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 NRP1O14786 923 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 KIAA0391O15091 583 aaKnown RBP5.07□□□□□ -1.6
EDEM3-203ENST00000439962 EPHB6O15197 1021 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 TADA2AO75478 443 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 MTA2O94776 668 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 MOCS3O95396 460 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 SLC34A2O95436 690 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 ALDH2P05091 517 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 IL9P15248 144 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 GTF2H1P32780 548 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 BRCC3P46736 316 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 KRT17Q04695 432 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 CAMK1Q14012 370 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 UBXN11Q5T124 520 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 SCARA3Q6AZY7 606 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 SLC27A1Q6PCB7 646 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 INTS8Q75QN2 995 aaKnown RBP5.07□□□□□ -1.6
EDEM3-203ENST00000439962 TAS1R3Q7RTX0 852 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 RHOT2Q8IXI1 618 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 LRRC57Q8N9N7 239 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 SLC30A5Q8TAD4 765 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 URGCPQ8TCY9 931 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 POMGNT1Q8WZA1 660 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 HLA-CQ95604 372 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 DRC1Q96MC2 740 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 ZNF558Q96NG5 402 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 SPAG5Q96R06 1193 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 C11orf84Q9BUA3 381 aaPredicted RBP5.07□□□□□ -1.6
EDEM3-203ENST00000439962 PDZD7Q9H5P4 517 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 SIX2Q9NPC8 291 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 LCMT1Q9UIC8 334 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 NAGPAQ9UK23 515 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 FRMD4BQ9Y2L6 1034 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 FAN1Q9Y2M0 1017 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 NUB1Q9Y5A7 615 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 WDFY3Q8IZQ1 3526 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 MYH10P35580 1976 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 TRIP11Q15643 1979 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 PTPRSQ13332 1948 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 LRRIQ3A6PVS8 624 aaPredicted RBP5.07□□□□□ -1.6
EDEM3-203ENST00000439962 MIF4GDA9UHW6 222 aaKnown RBP5.07□□□□□ -1.6
EDEM3-203ENST00000439962 ANKRD63C9JTQ0 380 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 PDE2AO00408 941 aaPredicted RBP5.07□□□□□ -1.6
EDEM3-203ENST00000439962 HSF2BPO75031 334 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 CAND2O75155 1236 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 SYF2O95926 243 aaKnown RBP5.07□□□□□ -1.6
EDEM3-203ENST00000439962 KRT19P08727 400 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 H2AFZP0C0S5 128 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 DLATP10515 647 aaKnown RBP5.07□□□□□ -1.6
EDEM3-203ENST00000439962 KLRC2P26717 231 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 HOXD13P35453 343 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 CYP2J2P51589 502 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 CLCNKBP51801 687 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 ERVK-21P61565 698 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 HTRA4P83105 476 aaPredicted RBP5.07□□□□□ -1.6
EDEM3-203ENST00000439962 CYP27A1Q02318 531 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 MAPK7Q13164 816 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 RAPGEF1Q13905 1077 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 RPS6KA1Q15418 735 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 C11orf63Q6NUN7 778 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 H2AFVQ71UI9 128 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 ZNF720Q7Z2F6 126 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 USP37Q86T82 979 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 FAM186BQ8IYM0 893 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 LRRC43Q8N309 656 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 COLGALT1Q8NBJ5 622 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 STKLD1Q8NE28 680 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 SPPL3Q8TCT6 385 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 KIFAP3Q92845 792 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 CCDC127Q96BQ5 260 aa5.07□□□□□ -1.6
EDEM3-203ENST00000439962 LRRC45Q96CN5 670 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms