RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 CILPO75339 1184 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 CYP1A1P04798 512 aaPredicted RBP15.95■□□□□ 0.14
CPSF7-205ENST00000439958 VPS41P49754 854 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 FAM102AQ5T9C2 384 aaPredicted RBP15.95■□□□□ 0.14
CPSF7-205ENST00000439958 DCAF12L1Q5VU92 463 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 DDX42Q86XP3 938 aaKnown RBP eCLIP15.95■□□□□ 0.14
CPSF7-205ENST00000439958 CITO14578 2027 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 GRIN2DO15399 1336 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 KPNA7A9QM74 516 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 SART1O43290 800 aaKnown RBP15.95■□□□□ 0.14
CPSF7-205ENST00000439958 RAD51CO43502 376 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 CCDC130P13994 396 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 ATICP31939 592 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 TRADDQ15628 312 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 PTPN20Q4JDL3 420 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 ATP13A4Q4VNC1 1196 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 SERINC5Q86VE9 423 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 SMG8Q8ND04 991 aaKnown RBP15.95■□□□□ 0.14
CPSF7-205ENST00000439958 APPL2Q8NEU8 664 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 IPO4Q8TEX9 1081 aaKnown RBP15.95■□□□□ 0.14
CPSF7-205ENST00000439958 HAUS1Q96CS2 278 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 C18orf8Q96DM3 657 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 CPXM1Q96SM3 734 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.95■□□□□ 0.14
CPSF7-205ENST00000439958 PDE4DIPQ5VU43 2346 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 GPR182O15218 404 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 POLR3GO15318 223 aaPredicted RBP15.95■□□□□ 0.14
CPSF7-205ENST00000439958 MYBL2P10244 700 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 RWDD2BP57060 319 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 UBXN11Q5T124 520 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 DSTYKQ6XUX3 929 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 SND1Q7KZF4 910 aaKnown RBP eCLIP15.95■□□□□ 0.14
CPSF7-205ENST00000439958 DEFB118Q96PH6 123 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 METTL5Q9NRN9 209 aaKnown RBP15.95■□□□□ 0.14
CPSF7-205ENST00000439958 STIM2Q9P246 746 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 NFU1Q9UMS0 254 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 SCINQ9Y6U3 715 aa15.95■□□□□ 0.14
CPSF7-205ENST00000439958 SYNJ2BP-COX16A0A087WUM0 186 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 CCDC151A5D8V7 595 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 F8VP50 259 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 PQBP1O60828 265 aaKnown RBP15.94■□□□□ 0.14
CPSF7-205ENST00000439958 CALB1P05937 261 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 KRT3P12035 628 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 PSMA2P25787 234 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 LMO2P25791 158 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 AXLP30530 894 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 KCNT1Q5JUK3 1230 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 SLFN11Q7Z7L1 901 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 CD302Q8IX05 232 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 MAGOHBQ96A72 148 aaKnown RBP15.94■□□□□ 0.14
CPSF7-205ENST00000439958 MED10Q9BTT4 135 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 PLEKHA5Q9HAU0 1116 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 COX16Q9P0S2 106 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 TULP2O00295 520 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 SPTLC1O15269 473 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 GLI1P08151 1106 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 GNL1P36915 607 aaPredicted RBP15.94■□□□□ 0.14
CPSF7-205ENST00000439958 KCNJ1P48048 391 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 TAF6P49848 677 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 DYNLT1P63172 113 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 ATP11AP98196 1134 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 PPP1R26Q5T8A7 1209 aaPredicted RBP15.94■□□□□ 0.14
CPSF7-205ENST00000439958 SCYL2Q6P3W7 929 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 CCDC105Q8IYK2 499 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 FEZF2Q8TBJ5 459 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 C1orf54Q8WWF1 131 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 CCDC114Q96M63 670 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 SCN1AP35498 2009 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 TCRBV7S2A1N4TA0A589 114 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 DDX3YO15523 660 aaKnown RBP15.94■□□□□ 0.14
CPSF7-205ENST00000439958 TTI1O43156 1089 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 B3GAT3O94766 335 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 MYBL1P10243 752 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 MMP8P22894 467 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 RABGGTBP53611 331 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 BRD3Q15059 726 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 TRIM51Q9BSJ1 452 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 RNF14Q9UBS8 474 aa15.94■□□□□ 0.14
CPSF7-205ENST00000439958 MIF4GDA9UHW6 222 aaKnown RBP15.93■□□□□ 0.14
CPSF7-205ENST00000439958 KBTBD13C9JR72 458 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 CD4P01730 458 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 THP07101 528 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 ZNF132P52740 706 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 IFRD2Q12894 506 aaPredicted RBP15.93■□□□□ 0.14
CPSF7-205ENST00000439958 MSANTD4Q8NCY6 345 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 ZNF560Q96MR9 790 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 PAAF1Q9BRP4 392 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 RNF208Q9H0X6 261 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 CYTH4Q9UIA0 394 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 ATP2C2O75185 946 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 LCP1P13796 627 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 TCF4P15884 667 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 IRF5Q13568 498 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 C11orf63Q6NUN7 778 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 WHAMMQ8TF30 809 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 ATG4AQ8WYN0 398 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 BCO2Q9BYV7 579 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 CYB561D2O14569 222 aa15.93■□□□□ 0.14
CPSF7-205ENST00000439958 RFC1P35251 1148 aaPredicted RBP15.93■□□□□ 0.14
CPSF7-205ENST00000439958 PPARDQ03181 441 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms