RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 CST3P01034 146 aaPredicted RBP8.06□□□□□ -1.12
COPS3-203ENST00000439936 CNPP09543 421 aaKnown RBP8.06□□□□□ -1.12
COPS3-203ENST00000439936 FGFR3P22607 806 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 NR2F2P24468 414 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 RPL13P26373 211 aaKnown RBP8.06□□□□□ -1.12
COPS3-203ENST00000439936 CA8P35219 290 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 NRIP1P48552 1158 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 ATP1A2P50993 1020 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 LILRA4P59901 499 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 DSG1Q02413 1049 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 ELAVL2Q12926 359 aaKnown RBP8.06□□□□□ -1.12
COPS3-203ENST00000439936 EDRF1Q3B7T1 1238 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 C9orf57Q5W0N0 161 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 CEP135Q66GS9 1140 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 KIAA1841Q6NSI8 718 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 PRSS55Q6UWB4 352 aaPredicted RBP8.06□□□□□ -1.12
COPS3-203ENST00000439936 CYP2U1Q7Z449 544 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 GPR65Q8IYL9 337 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 CSGALNACT2Q8N6G5 542 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 C1orf127Q8N9H9 656 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 TRIML1Q8N9V2 468 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 CXorf38Q8TB03 319 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 LNX1Q8TBB1 728 aaPredicted RBP8.06□□□□□ -1.12
COPS3-203ENST00000439936 RIN2Q8WYP3 895 aaPredicted RBP8.06□□□□□ -1.12
COPS3-203ENST00000439936 CCDC127Q96BQ5 260 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 EEF2KMTQ96G04 330 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 BORCS6Q96GS4 357 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 KLHL5Q96PQ7 755 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 DUSP9Q99956 384 aaKnown RBP8.06□□□□□ -1.12
COPS3-203ENST00000439936 TTPALQ9BTX7 342 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 NUP62CLQ9H1M0 184 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 RXFP1Q9HBX9 757 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 ENAMQ9NRM1 1142 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 MRPL17Q9NRX2 175 aaKnown RBP8.06□□□□□ -1.12
COPS3-203ENST00000439936 AGAP1Q9UPQ3 857 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 FRMD4BQ9Y2L6 1034 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 NUB1Q9Y5A7 615 aa8.06□□□□□ -1.12
COPS3-203ENST00000439936 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.06□□□□□ -1.12
COPS3-203ENST00000439936 COL6A3P12111 3177 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.05□□□□□ -1.12
COPS3-203ENST00000439936 TRIM49BA6NDI0 452 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 TMEM229AB2RXF0 380 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 M0QZQ0 153 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 PSMA7O14818 248 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 CETN3O15182 167 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 LINC01565O15544 149 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 NCK2O43639 380 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 CLASP2O75122 1294 aaKnown RBP8.05□□□□□ -1.12
COPS3-203ENST00000439936 AKAP3O75969 853 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 URODP06132 367 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 TMEM191BP0C7N4 346 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 DLATP10515 647 aaKnown RBP8.05□□□□□ -1.12
COPS3-203ENST00000439936 TNNI1P19237 187 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 TKTP29401 623 aaKnown RBP8.05□□□□□ -1.12
COPS3-203ENST00000439936 PSMC2P35998 433 aaKnown RBP8.05□□□□□ -1.12
COPS3-203ENST00000439936 LTBRP36941 435 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 PPP1R2P41236 205 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 GLUD2P49448 558 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 DLG4P78352 724 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 RBM10P98175 930 aaKnown RBP8.05□□□□□ -1.12
COPS3-203ENST00000439936 FKBP3Q00688 224 aaKnown RBP8.05□□□□□ -1.12
COPS3-203ENST00000439936 STIM1Q13586 685 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 KCNC3Q14003 757 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 PTPN14Q15678 1187 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 DUSP6Q16828 381 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 DUOXA2Q1HG44 320 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 RTP2Q5QGT7 225 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 KLHL10Q6JEL2 608 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 TRAPPC11Q7Z392 1133 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 SIX5Q8N196 739 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 EFHBQ8N7U6 833 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 SLC22A17Q8WUG5 538 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 PPP2R3CQ969Q6 453 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 PABPC5Q96DU9 382 aaKnown RBP8.05□□□□□ -1.12
COPS3-203ENST00000439936 ANKRD36BP1Q96IX9 119 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 SUSD3Q96L08 255 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 FNBP1Q96RU3 617 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 TSG101Q99816 390 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 CLSTN3Q9BQT9 956 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 ETNK1Q9HBU6 452 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 FNIP2Q9P278 1114 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 SIX4Q9UIU6 781 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 SSX2IPQ9Y2D8 614 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 SF3B1O75533 1304 aaKnown RBP eCLIP8.05□□□□□ -1.123e-6■■■■■ 137.9
COPS3-203ENST00000439936 PTPRJQ12913 1337 aa8.05□□□□□ -1.12
COPS3-203ENST00000439936 A0A1W2PRU2 124 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 LRRIQ3A6PVS8 624 aaPredicted RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 KPNA7A9QM74 516 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 MAPK13O15264 365 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 TEX28O15482 410 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 MBD3O95983 291 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 TNNC2P02585 160 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 C4BPAP04003 597 aaKnown RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 ITGB3P05106 788 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 RHOQP17081 205 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 RPL17P18621 184 aaKnown RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 PAX3P23760 479 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 KLRC2P26717 231 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 POLR2BP30876 1174 aaKnown RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 AARSP49588 968 aaKnown RBP eCLIP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms