RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 F5H6K3 240 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 SLC16A4O15374 487 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 MTA2O94776 668 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 NCF2P19878 526 aaPredicted RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 EFNA5P52803 228 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ITGA8P53708 1063 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 CACNB3P54284 484 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ABCE1P61221 599 aaKnown RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 KLRC3Q07444 240 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 RALGDSQ12967 914 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 PDIA2Q13087 525 aaKnown RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 DNAJC3Q13217 504 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 EMC10Q5UCC4 262 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 POTEAQ6S8J7 498 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 LRRC55Q6ZSA7 311 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 OR9Q1Q8NGQ5 310 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 DNAJC9Q8WXX5 260 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 KRT35Q92764 455 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 SLC35B4Q969S0 331 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 PURBQ96QR8 312 aaKnown RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 PCDH18Q9HCL0 1135 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 LNPEPQ9UIQ6 1025 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 SATB2Q9UPW6 733 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 RSPH10B2B2RC85 870 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 TCP10L2B9ZVM9 353 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 FOXN3O00409 490 aaPredicted RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 NVLO15381 856 aaKnown RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 MED24O75448 989 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 RSPH10BP0C881 870 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 HOXD10P28358 340 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 PMLP29590 882 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 CHKAP35790 457 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 OXCT1P55809 520 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ILF2Q12905 390 aaKnown RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 RASA2Q15283 850 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 TBCCQ15814 346 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 UGP2Q16851 508 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ACCSLQ4AC99 568 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 KCNK18Q7Z418 384 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 NT5DC3Q86UY8 548 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 EFHBQ8N7U6 833 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 C4orf32Q8N8J7 132 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 TTC8Q8TAM2 541 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ANKRD49Q8WVL7 239 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 PGM2Q96G03 612 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 FAM161BQ96MY7 647 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ANKRD27Q96NW4 1050 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 SMYD2Q9NRG4 433 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 NSMCE4AQ9NXX6 385 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ZFATQ9P243 1243 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ATXN10Q9UBB4 475 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 TMED5Q9Y3A6 229 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 SAT1P21673 171 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 EEF1B2P24534 225 aaKnown RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 SDC4P31431 198 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 QARSP47897 775 aaKnown RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 MRPS35P82673 323 aaKnown RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 EPHA7Q15375 998 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 C1orf146Q5VVC0 180 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 TMEM154Q6P9G4 183 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 RFX8Q6ZV50 586 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 BTN2A1Q7KYR7 527 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 MIGA2Q7L4E1 593 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 DTX3LQ8TDB6 740 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 CLMNQ96JQ2 1002 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 BTBD6Q96KE9 485 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 LXNQ9BS40 222 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 FRMD8P1Q9BZ68 369 aaPredicted RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 TTYH3Q9C0H2 523 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 CDC42EP4Q9H3Q1 356 aaKnown RBP6.66□□□□□ -1.34
BDNF-211ENST00000439476 NPHS2Q9NP85 383 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 PARVAQ9NVD7 372 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 SLC13A4Q9UKG4 626 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 C15orf41Q9Y2V0 281 aa6.66□□□□□ -1.34
BDNF-211ENST00000439476 ATXN2Q99700 1313 aaKnown RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 TBKBP1A7MCY6 615 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 E7ENQ6 273 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 GOLGA8TH3BQL2 631 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 DDX3XO00571 662 aaKnown RBP eCLIP6.65□□□□□ -1.34
BDNF-211ENST00000439476 OPLAHO14841 1288 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 SORBS3O60504 671 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 RPS6KA4O75676 772 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 SMNDC1O75940 238 aaKnown RBP eCLIP6.65□□□□□ -1.34
BDNF-211ENST00000439476 KRT4P19013 534 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 TARSP26639 723 aaKnown RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 SERPINB10P48595 397 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 FNTAP49354 379 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 ARSEP51690 589 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 PPP4CP60510 307 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 PSMC5P62195 406 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 GIT2Q14161 759 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 ERMARDQ5T6L9 678 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 SMIM5Q71RC9 77 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 RELL1Q8IUW5 271 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 ICA1LQ8NDH6 482 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 CEP19Q96LK0 163 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 FGD4Q96M96 766 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 HEXIM2Q96MH2 286 aaKnown RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 FERD3LQ96RJ6 166 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 SIKE1Q9BRV8 207 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms