RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 NSUN6Q8TEA1 469 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 GPR88Q9GZN0 384 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 IQCGQ9H095 443 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZNF536O15090 1300 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 ATXN2Q99700 1313 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 LOC100653049A0A140TA62 436 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 KRT34O76011 436 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 PGK2P07205 417 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 TPBGLP0DKB5 382 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 PECAM1P16284 738 aaPredicted RBP10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 SP100P23497 879 aaPredicted RBP10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 ALCAMQ13740 583 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 DHX34Q14147 1143 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 PSMD6Q15008 389 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 FAXCQ5TGI0 409 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 LIN9Q5TKA1 542 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 PCNX4Q63HM2 1172 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 TMEM161BQ8NDZ6 487 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 TTC16Q8NEE8 873 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 WDR60Q8WVS4 1066 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 BORCS6Q96GS4 357 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 RUNDC3BQ96NL0 473 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 OCEL1Q9H607 264 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 IKBKGQ9Y6K9 419 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 FAM187AA6NFU0 413 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 PODXLO00592 558 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 DHX15O43143 795 aaKnown RBP10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 ONECUT3O60422 494 aaPredicted RBP10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 HAUS5O94927 633 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 TTC4O95801 387 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 SERPINB6P35237 376 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 PTGIRP43119 386 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 RAB27AP51159 221 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 SPARCL1Q14515 664 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 CDO1Q16878 200 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 SCARA3Q6AZY7 606 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 IZUMO2Q6UXV1 221 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 RGS9BPQ6ZS82 235 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 CKAP2Q8WWK9 683 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 P3H4Q92791 437 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 ARL8BQ9NVJ2 186 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 PARP2Q9UGN5 583 aa10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 CORO1CQ9ULV4 474 aaPredicted RBP10.46□□□□□ -0.74
CDC42SE1-202ENST00000439374 UMODL1Q5DID0 1318 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 MYOCOSA0A1B0GUC4 107 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 GTPBP10A4D1E9 387 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 VWA5AO00534 786 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 DNAJC6O75061 913 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ZMPSTE24O75844 475 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 KRT1P04264 644 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 GSTA1P08263 222 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 PAEPP09466 180 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 MAGEA4P43358 317 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ARSEP51690 589 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 BASP1P80723 227 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ACAP1Q15027 740 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 GRAMD1BQ3KR37 738 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 SCYL2Q6P3W7 929 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ZCCHC23Q6ZST2 131 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 SHKBP1Q8TBC3 707 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 MECRQ9BV79 373 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 PIH1D1Q9NWS0 290 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 CLIC5Q9NZA1 410 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ADGRA3Q8IWK6 1321 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 MYH11P35749 1972 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 B2RBV5 119 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 SMAPO00193 183 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 PLSCR1O15162 318 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 PDE5AO76074 875 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 NELFEP18615 380 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 AMPD1P23109 780 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ATP5DP30049 168 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 PGM1P36871 562 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 JAK3P52333 1124 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 YWHAGP61981 247 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ARHGAP27Q6ZUM4 889 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 RHPN2Q8IUC4 686 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 MAB21L3Q8N8X9 362 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 PYDC1Q8WXC3 89 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 SNF8Q96H20 258 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 FAM111AQ96PZ2 611 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 TMEM121Q9BTD3 319 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 SLC38A10Q9HBR0 1119 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 DMAC2Q9NW81 257 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 CYP39A1Q9NYL5 469 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 SLC17A7Q9P2U7 560 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 CHMP2BQ9UQN3 213 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 MIF4GDA9UHW6 222 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 MAP3K7O43318 606 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 GRAP2O75791 330 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 F7P08709 466 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 SKIP12755 728 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 PPP2R5DQ14738 602 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 EMC2Q15006 297 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 C1orf146Q5VVC0 180 aa10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 CDCA2Q69YH5 1023 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ALYREFQ86V81 257 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 GBP7Q8N8V2 638 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE1-202ENST00000439374 ANKLE1Q8NAG6 615 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms