RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ITGB1BP2Q9UKP3 347 aa16.6■□□□□ 0.25
DHFR-201ENST00000439211 IRS2Q9Y4H2 1338 aa16.6■□□□□ 0.25
DHFR-201ENST00000439211 KRT38O76015 456 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 PHBP35232 272 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 RFC1P35251 1148 aaPredicted RBP16.59■□□□□ 0.25
DHFR-201ENST00000439211 ASPHQ12797 758 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 SLC47A2Q86VL8 602 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 DGCR14Q96DF8 476 aaKnown RBP16.59■□□□□ 0.25
DHFR-201ENST00000439211 PRMT6Q96LA8 375 aaPredicted RBP16.59■□□□□ 0.25
DHFR-201ENST00000439211 ZDHHC15Q96MV8 337 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 ANAPC5Q9UJX4 755 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 TMEM59LQ9UK28 342 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 VAV3Q9UKW4 847 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 PCYT1AP49585 367 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 KRT17Q04695 432 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 CMPK2Q5EBM0 449 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 BTBD10Q9BSF8 475 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 PI4K2AQ9BTU6 479 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 THTPAQ9BU02 230 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 FAM47DPA6NHR8 397 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 CALCAP01258 141 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 NAA20P61599 178 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 MDH1BQ5I0G3 518 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 SLC25A41Q8N5S1 370 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 CCDC110Q8TBZ0 833 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 CERKQ8TCT0 537 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 GATA6Q92908 595 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 HSD17B14Q9BPX1 270 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 ECSITQ9BQ95 431 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 CNOT7Q9UIV1 285 aaKnown RBP16.59■□□□□ 0.25
DHFR-201ENST00000439211 COG5Q9UP83 839 aa16.59■□□□□ 0.25
DHFR-201ENST00000439211 NSFP46459 744 aaKnown RBP16.58■□□□□ 0.25
DHFR-201ENST00000439211 PPP3CAQ08209 521 aa16.58■□□□□ 0.25
DHFR-201ENST00000439211 DMP1Q13316 513 aaPredicted RBP16.58■□□□□ 0.25
DHFR-201ENST00000439211 LENG9Q96B70 501 aa16.58■□□□□ 0.25
DHFR-201ENST00000439211 NSL1Q96IY1 281 aa16.58■□□□□ 0.25
DHFR-201ENST00000439211 C1orf112Q9NSG2 853 aa16.58■□□□□ 0.25
DHFR-201ENST00000439211 TUBA8Q9NY65 449 aaPredicted RBP16.58■□□□□ 0.25
DHFR-201ENST00000439211 EURLQ9NYK6 297 aa16.58■□□□□ 0.25
DHFR-201ENST00000439211 ARAP2Q8WZ64 1704 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 CCDC88AQ3V6T2 1871 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 SPDYE16A6NNV3 312 aaPredicted RBP16.58■□□□□ 0.24
DHFR-201ENST00000439211 HNRNPCL1O60812 293 aaKnown RBP16.58■□□□□ 0.24
DHFR-201ENST00000439211 PLA2G4FQ68DD2 849 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 CBWD2Q8IUF1 395 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 SLC26A7Q8TE54 656 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 MASTLQ96GX5 879 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 EIF2AQ9BY44 585 aaKnown RBP16.58■□□□□ 0.24
DHFR-201ENST00000439211 SMYD3Q9H7B4 428 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 KMT5AQ9NQR1 393 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 B2RBV5 119 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 SLC26A4O43511 780 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 P4HBP07237 508 aaKnown RBP16.58■□□□□ 0.24
DHFR-201ENST00000439211 RARGP13631 454 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 JAM2P57087 298 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 C4orf33Q8N1A6 199 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 GRIP2Q9C0E4 1043 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 WNT8AQ9H1J5 351 aa16.58■□□□□ 0.24
DHFR-201ENST00000439211 STX18Q9P2W9 335 aaKnown RBP16.58■□□□□ 0.24
DHFR-201ENST00000439211 POLRMTO00411 1230 aaKnown RBP16.57■□□□□ 0.24
DHFR-201ENST00000439211 HOXA10P31260 410 aaPredicted RBP16.57■□□□□ 0.24
DHFR-201ENST00000439211 SPOCK2Q92563 424 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 DHX38Q92620 1227 aaKnown RBP16.57■□□□□ 0.24
DHFR-201ENST00000439211 SERPINB12Q96P63 405 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 CDC42EP4Q9H3Q1 356 aaKnown RBP16.57■□□□□ 0.24
DHFR-201ENST00000439211 VPS37BQ9H9H4 285 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 ALG13Q9NP73 1137 aaKnown RBP16.57■□□□□ 0.24
DHFR-201ENST00000439211 HEY2Q9UBP5 337 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 USP1O94782 785 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 COILP38432 576 aaPredicted RBP16.57■□□□□ 0.24
DHFR-201ENST00000439211 QARSP47897 775 aaKnown RBP16.57■□□□□ 0.24
DHFR-201ENST00000439211 EIF2B2P49770 351 aaKnown RBP16.57■□□□□ 0.24
DHFR-201ENST00000439211 MTMR1Q13613 665 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 SLC13A5Q86YT5 568 aaPredicted RBP16.57■□□□□ 0.24
DHFR-201ENST00000439211 TRIML2Q8N7C3 387 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 GIPC3Q8TF64 312 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 CPA5Q8WXQ8 436 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 FAM84AQ96KN4 292 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 SPATA17Q96L03 361 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 KCNH7Q9NS40 1196 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 SELENONQ9NZV5 590 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 DENND3A2RUS2 1198 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 H3BRJ5 948 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 PFASO15067 1338 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 KIAA0391O15091 583 aaKnown RBP16.57■□□□□ 0.24
DHFR-201ENST00000439211 ARFIP2P53365 341 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 TRIP10Q15642 601 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 RASGEF1CQ8N431 466 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 PRELID2Q8N945 189 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 MKL1Q969V6 931 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 PPP1R14BQ96C90 147 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 GMCL1Q96IK5 515 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 CEP170P1Q96L14 293 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 C9orf72Q96LT7 481 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 TRIM55Q9BYV6 548 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 Q9H521 79 aa16.57■□□□□ 0.24
DHFR-201ENST00000439211 KDSRQ06136 332 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 STRIP1Q5VSL9 837 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 MTBPQ96DY7 904 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 ANLNQ9NQW6 1124 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms