RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.13
LINC00399-201ENST00000439008 GTF3C4Q9UKN8 822 aa14.24□□□□□ -0.13
LINC00399-201ENST00000439008 FRMD4BQ9Y2L6 1034 aa14.24□□□□□ -0.13
LINC00399-201ENST00000439008 WDFY4Q6ZS81 3184 aa14.24□□□□□ -0.13
LINC00399-201ENST00000439008 ZDBF2Q9HCK1 2354 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 MYBPHLA2RUH7 354 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 XYLBO75191 536 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 STAU1O95793 577 aaKnown RBP14.23□□□□□ -0.13
LINC00399-201ENST00000439008 HLA-DRAP01903 254 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 LRG1P02750 347 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 PDGFRBP09619 1106 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 LAMP2P13473 410 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 GJA1P17302 382 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 CEBPBP17676 345 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 WARSP23381 471 aaKnown RBP14.23□□□□□ -0.13
LINC00399-201ENST00000439008 CCNE1P24864 410 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 GBP2P32456 591 aaPredicted RBP14.23□□□□□ -0.13
LINC00399-201ENST00000439008 PSMC2P35998 433 aaKnown RBP14.23□□□□□ -0.13
LINC00399-201ENST00000439008 RAP1GAPP47736 663 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 GCLMP48507 274 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 GPR15P49685 360 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 PSMC1P62191 440 aaKnown RBP14.23□□□□□ -0.13
LINC00399-201ENST00000439008 ZXDAP98168 799 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 BIRC3Q13489 604 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 NCOA4Q13772 614 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 PTPN21Q16825 1174 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 WDR72Q3MJ13 1102 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 PABPC1LQ4VXU2 614 aaKnown RBP14.23□□□□□ -0.13
LINC00399-201ENST00000439008 INTS6LQ5JSJ4 861 aaKnown RBP14.23□□□□□ -0.13
LINC00399-201ENST00000439008 TTI2Q6NXR4 508 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 TMC8Q8IU68 726 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 NPAS3Q8IXF0 933 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 THEM5Q8N1Q8 247 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 TMEM86AQ8N2M4 240 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 GPR152Q8TDT2 470 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 FGF13Q92913 245 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 ACBD6Q9BR61 282 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 CORO1BQ9BR76 489 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 PI4K2AQ9BTU6 479 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 DPEP3Q9H4B8 488 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 SMYD3Q9H7B4 428 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 VRTNQ9H8Y1 702 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 APOBEC3GQ9HC16 384 aaKnown RBP14.23□□□□□ -0.13
LINC00399-201ENST00000439008 KIAA1468Q9P260 1216 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 EPS15L1Q9UBC2 864 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 NXF1Q9UBU9 619 aaKnown RBP14.23□□□□□ -0.13
LINC00399-201ENST00000439008 HOOK1Q9UJC3 728 aaKnown RBP14.23□□□□□ -0.13
LINC00399-201ENST00000439008 MAFFQ9ULX9 164 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 GREB1Q4ZG55 1949 aa14.23□□□□□ -0.13
LINC00399-201ENST00000439008 DENND4CQ5VZ89 1909 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 IKBKBO14920 756 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 PHACTR2O75167 634 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 HAPLN1P10915 354 aaPredicted RBP14.22□□□□□ -0.13
LINC00399-201ENST00000439008 PTPN2P17706 415 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 EPHA5P54756 1037 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 SDHAF4Q5VUM1 108 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 KLHL10Q6JEL2 608 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 FAM171BQ6P995 826 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 DPH6Q7L8W6 267 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 GPT2Q8TD30 523 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 TAS1R2Q8TE23 839 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 EDAQ92838 391 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 SEMA4DQ92854 862 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 FGF14Q92915 247 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 ACSF2Q96CM8 615 aaPredicted RBP14.22□□□□□ -0.13
LINC00399-201ENST00000439008 ZSWIM3Q96MP5 696 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 MMS19Q96T76 1030 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 KCNK12Q9HB15 430 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 AVENQ9NQS1 362 aaPredicted RBP14.22□□□□□ -0.13
LINC00399-201ENST00000439008 TMEM30AQ9NV96 361 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 ABI2Q9NYB9 513 aaPredicted RBP14.22□□□□□ -0.13
LINC00399-201ENST00000439008 CDH7Q9ULB5 785 aa14.22□□□□□ -0.13
LINC00399-201ENST00000439008 OBSL1O75147 1896 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 ANHXE9PGG2 379 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 CETN3O15182 167 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 NARSO43776 548 aaKnown RBP14.21□□□□□ -0.13
LINC00399-201ENST00000439008 TACC1O75410 805 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 ASS1P00966 412 aaKnown RBP14.21□□□□□ -0.13
LINC00399-201ENST00000439008 CYP2F1P24903 491 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 RPL13P26373 211 aaKnown RBP14.21□□□□□ -0.13
LINC00399-201ENST00000439008 ATICP31939 592 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 LHX1P48742 406 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 AP3M2P53677 418 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 STX17P56962 302 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 TRPC3Q13507 836 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 HTR4Q13639 388 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 PARM1Q6UWI2 310 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 SCARA5Q6ZMJ2 495 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 INTS8Q75QN2 995 aaKnown RBP14.21□□□□□ -0.13
LINC00399-201ENST00000439008 PLCD3Q8N3E9 789 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 SPATA18Q8TC71 538 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 GIPC2Q8TF65 315 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 NELFBQ8WX92 580 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 MCRS1Q96EZ8 462 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 ASIC4Q96FT7 647 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 DHTKD1Q96HY7 919 aaPredicted RBP14.21□□□□□ -0.13
LINC00399-201ENST00000439008 SEPT5Q99719 369 aaPredicted RBP14.21□□□□□ -0.13
LINC00399-201ENST00000439008 SYT15Q9BQS2 421 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 LRFN3Q9BTN0 628 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 MKNK1Q9BUB5 465 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms