RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 CATSPER3Q86XQ3 398 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 SYT12Q8IV01 421 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 TMEFF1Q8IYR6 380 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 MAB21L3Q8N8X9 362 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 CCDC26Q8TAB7 109 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 OXER1Q8TDS5 423 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 KCNB2Q92953 911 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 CD101Q93033 1021 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 GCNAQ96QF7 691 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 POLR3CQ9BUI4 534 aaPredicted RBP9.41□□□□□ -0.9
SCRN1-208ENST00000438497 KIFC3Q9BVG8 833 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 CDT1Q9H211 546 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 TMEM74BQ9NUR3 256 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 TDP1Q9NUW8 608 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 MBD1Q9UIS9 605 aaPredicted RBP9.41□□□□□ -0.9
SCRN1-208ENST00000438497 ZMYM5Q9UJ78 669 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 TBX20Q9UMR3 447 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 GON4LQ3T8J9 2241 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 LAMA5O15230 3695 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 SHROOM3Q8TF72 1996 aa9.41□□□□□ -0.9
SCRN1-208ENST00000438497 CITO14578 2027 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 MTMR11A4FU01 709 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 ARHGEF35A5YM69 484 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 TNFRSF10BO14763 440 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 OPHN1O60890 802 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 PSMA5P28066 241 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 C19orf57Q0VDD7 668 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 NR1H3Q13133 447 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 STK3Q13188 491 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 HNRNPDQ14103 355 aaKnown RBP9.4□□□□□ -0.9
SCRN1-208ENST00000438497 MYBPC2Q14324 1141 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 VEPH1Q14D04 833 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 PDGFRLQ15198 375 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 TRIP6Q15654 476 aaKnown RBP9.4□□□□□ -0.9
SCRN1-208ENST00000438497 ZNF568Q3ZCX4 644 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 C2orf27AQ580R0 203 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 NAIF1Q69YI7 327 aaPredicted RBP9.4□□□□□ -0.9
SCRN1-208ENST00000438497 ARMCX6Q7L4S7 300 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 ADAM32Q8TC27 787 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 GIPC2Q8TF65 315 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 RLN3Q8WXF3 142 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 EZH1Q92800 747 aaPredicted RBP9.4□□□□□ -0.9
SCRN1-208ENST00000438497 USP13Q92995 863 aaPredicted RBP9.4□□□□□ -0.9
SCRN1-208ENST00000438497 ZNF274Q96GC6 653 aaPredicted RBP9.4□□□□□ -0.9
SCRN1-208ENST00000438497 LPIN3Q9BQK8 851 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 LARP6Q9BRS8 491 aaKnown RBP9.4□□□□□ -0.9
SCRN1-208ENST00000438497 GTPBP2Q9BX10 602 aaKnown RBP9.4□□□□□ -0.9
SCRN1-208ENST00000438497 ECT2Q9H8V3 914 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 IL21Q9HBE4 155 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 PTPRHQ9HD43 1115 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 TUFT1Q9NNX1 390 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 CNTN3Q9P232 1028 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 HSFX1Q9UBD0 423 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 SLC6A14Q9UN76 642 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 CCL26Q9Y258 94 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 PCDHB9Q9Y5E1 797 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 CACNA1EQ15878 2313 aa9.4□□□□□ -0.9
SCRN1-208ENST00000438497 HELZ2Q9BYK8 2649 aaKnown RBP9.39□□□□□ -0.91
SCRN1-208ENST00000438497 ASXL3Q9C0F0 2248 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 FAM205CA6NFA0 338 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 CCDC169A6NNP5 214 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 MED24O75448 989 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 ALDH1A2O94788 518 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 CFIP05156 583 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 MCF2P10911 925 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 DPP6P42658 865 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 PTGER3P43115 390 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 CDR1P51861 262 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 GFPT1Q06210 699 aaPredicted RBP9.39□□□□□ -0.91
SCRN1-208ENST00000438497 DMP1Q13316 513 aaPredicted RBP9.39□□□□□ -0.91
SCRN1-208ENST00000438497 DUOXA1Q1HG43 343 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 SLC10A6Q3KNW5 377 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 OVOS1Q6IE37 1185 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 CCNI2Q6ZMN8 369 aaPredicted RBP9.39□□□□□ -0.91
SCRN1-208ENST00000438497 RASSF3Q86WH2 238 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 CPA6Q8N4T0 437 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 CCDC33Q8N5R6 958 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 TTC9BQ8N6N2 239 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 PNPLA1Q8N8W4 532 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 MDM1Q8TC05 714 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 KIFAP3Q92845 792 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 CNOT6LQ96LI5 555 aaKnown RBP9.39□□□□□ -0.91
SCRN1-208ENST00000438497 TARS2Q9BW92 718 aaKnown RBP9.39□□□□□ -0.91
SCRN1-208ENST00000438497 MRPL4Q9BYD3 311 aaKnown RBP9.39□□□□□ -0.91
SCRN1-208ENST00000438497 TMEM134Q9H6X4 195 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 KIF9Q9HAQ2 790 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 GJB4Q9NTQ9 266 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 DUS2Q9NX74 493 aaKnown RBP9.39□□□□□ -0.91
SCRN1-208ENST00000438497 PLXNB3Q9ULL4 1909 aa9.39□□□□□ -0.91
SCRN1-208ENST00000438497 URB1O60287 2271 aaKnown RBP9.38□□□□□ -0.91
SCRN1-208ENST00000438497 LARGE1O95461 756 aa9.38□□□□□ -0.91
SCRN1-208ENST00000438497 F11P03951 625 aa9.38□□□□□ -0.91
SCRN1-208ENST00000438497 HARSP12081 509 aaKnown RBP9.38□□□□□ -0.91
SCRN1-208ENST00000438497 CD59P13987 128 aa9.38□□□□□ -0.91
SCRN1-208ENST00000438497 DDX6P26196 483 aaKnown RBP eCLIP9.38□□□□□ -0.91
SCRN1-208ENST00000438497 P2RY2P41231 377 aa9.38□□□□□ -0.91
SCRN1-208ENST00000438497 SEC13P55735 322 aa9.38□□□□□ -0.91
SCRN1-208ENST00000438497 BYSLQ13895 437 aaKnown RBP9.38□□□□□ -0.91
SCRN1-208ENST00000438497 TOB2Q14106 344 aaPredicted RBP9.38□□□□□ -0.91
SCRN1-208ENST00000438497 CRY1Q16526 586 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1084.6 ms