RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 MFSD7Q6UXD7 560 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 TFAP2BQ92481 460 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 CPSF3Q9UKF6 684 aaKnown RBP12.84□□□□□ -0.35
CLDN4-203ENST00000435050 CST8O60676 142 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 EDNRBP24530 442 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 ARHGAP1Q07960 439 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 BBS9Q3SYG4 887 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 TTC27Q6P3X3 843 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 TMC3Q7Z5M5 1100 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 RASGEF1CQ8N431 466 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 C12orf29Q8N999 325 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 NT5C1AQ9BXI3 368 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 GPATCH2LQ9NWQ4 482 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 TNFSF13BQ9Y275 285 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 SMPD1P17405 629 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 RFC1P35251 1148 aaPredicted RBP12.84□□□□□ -0.35
CLDN4-203ENST00000435050 TMED2Q15363 201 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 GOLGA7BQ2TAP0 167 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 MTHFD1LQ6UB35 978 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 TLK2Q86UE8 772 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 CCDC13Q8IYE1 715 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 GTF3C2Q8WUA4 911 aaPredicted RBP12.84□□□□□ -0.35
CLDN4-203ENST00000435050 SNF8Q96H20 258 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 TJP2Q9UDY2 1190 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 TNS1Q9HBL0 1735 aaKnown RBP12.83□□□□□ -0.35
CLDN4-203ENST00000435050 ZSCAN5DPP0CG00 497 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 AARSP49588 968 aaKnown RBP eCLIP12.83□□□□□ -0.36
CLDN4-203ENST00000435050 ZKSCAN8Q15776 578 aaPredicted RBP12.83□□□□□ -0.36
CLDN4-203ENST00000435050 C1orf127Q8N9H9 656 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 INTS9Q9NV88 658 aaKnown RBP12.83□□□□□ -0.36
CLDN4-203ENST00000435050 R3HDM2Q9Y2K5 976 aaKnown RBP12.83□□□□□ -0.36
CLDN4-203ENST00000435050 MROH7Q68CQ1 1323 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 GREB1LQ9C091 1923 aaPredicted RBP12.83□□□□□ -0.36
CLDN4-203ENST00000435050 CAPN9O14815 690 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 CENPCQ03188 943 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 MBTD1Q05BQ5 628 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 MCL1Q07820 350 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 SMAD1Q15797 465 aaKnown RBP12.83□□□□□ -0.36
CLDN4-203ENST00000435050 PPP1R2P3Q6NXS1 205 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 PPP1R21Q6ZMI0 780 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 MICALCLQ6ZW33 695 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 EPS8L3Q8TE67 593 aaKnown RBP12.83□□□□□ -0.36
CLDN4-203ENST00000435050 RNF34Q969K3 372 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 POLR2AP24928 1970 aaKnown RBP12.83□□□□□ -0.36
CLDN4-203ENST00000435050 MCF2LO15068 1137 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 CAND2O75155 1236 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 C22orf31O95567 290 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 GBP1P32455 592 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 HSPA9P38646 679 aaKnown RBP12.83□□□□□ -0.36
CLDN4-203ENST00000435050 ZNF200P98182 395 aaPredicted RBP12.83□□□□□ -0.36
CLDN4-203ENST00000435050 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
CLDN4-203ENST00000435050 CTAGE3PQ8IX95 158 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 GDAP1Q8TB36 358 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 CABS1Q96KC9 395 aa12.83□□□□□ -0.36
CLDN4-203ENST00000435050 UNGP13051 313 aaPredicted RBP12.82□□□□□ -0.36
CLDN4-203ENST00000435050 BYSLQ13895 437 aaKnown RBP12.82□□□□□ -0.36
CLDN4-203ENST00000435050 ANKMY2Q8IV38 441 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 PALM2Q8IXS6 379 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 DDX1Q92499 740 aaKnown RBP12.82□□□□□ -0.36
CLDN4-203ENST00000435050 TMEM121Q9BTD3 319 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 AVENQ9NQS1 362 aaPredicted RBP12.82□□□□□ -0.36
CLDN4-203ENST00000435050 HOMER3Q9NSC5 361 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 NKIRAS1Q9NYS0 192 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 SEPT10Q9P0V9 454 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 CNTNAP2Q9UHC6 1331 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 HUS1O60921 280 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 SHBGP04278 402 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 MCF2P10911 925 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 PIGHQ14442 188 aaPredicted RBP12.82□□□□□ -0.36
CLDN4-203ENST00000435050 PAN2Q504Q3 1202 aaKnown RBP12.82□□□□□ -0.36
CLDN4-203ENST00000435050 LRRC31Q6UY01 552 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 TAOK1Q7L7X3 1001 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 ZNF572Q7Z3I7 529 aaPredicted RBP12.82□□□□□ -0.36
CLDN4-203ENST00000435050 RCOR2Q8IZ40 523 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 TTC16Q8NEE8 873 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 MAML3Q96JK9 1138 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 FAM53CQ9NYF3 392 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 HMGXB4Q9UGU5 601 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 MICAL2O94851 1124 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 HOXC6P09630 235 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 ETS1P14921 441 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 TCF4P15884 667 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 SDC4P31431 198 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 LIG3P49916 1009 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 PPP2R2AP63151 447 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 LMNB2Q03252 620 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 ZNF844Q08AG5 666 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 IFT88Q13099 833 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 NOTUMQ6P988 496 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 CCDC62Q6P9F0 684 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 JOSD2Q8TAC2 188 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 DDX23Q9BUQ8 820 aaKnown RBP12.82□□□□□ -0.36
CLDN4-203ENST00000435050 ASNSD1Q9NWL6 643 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 TSPAN16Q9UKR8 245 aa12.82□□□□□ -0.36
CLDN4-203ENST00000435050 A6NJR5 290 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 NEBLO76041 1014 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 EIF3BP55884 814 aaKnown RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 SRRM1Q8IYB3 904 aaKnown RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 LRRC4Q9HBW1 653 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms