RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 POLR2EP19388 210 aaKnown RBP12.74□□□□□ -0.37
UBE3B-203ENST00000434735 VEGFBP49765 207 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 RBBP7Q16576 425 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 TCP11X2Q5H9J9 407 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 SYCP2LQ5T4T6 812 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 TRIM72Q6ZMU5 477 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 CATSPER3Q86XQ3 398 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 TTC13Q8NBP0 860 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 ZNF296Q8WUU4 475 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-203ENST00000434735 SYT15Q9BQS2 421 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 SPG21Q9NZD8 308 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 TEKT2Q9UIF3 430 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 PTCH2Q9Y6C5 1203 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 SPATA31D1Q6ZQQ2 1576 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 SLC9A3R1O14745 358 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-203ENST00000434735 TEX33O43247 280 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 FTLP02792 175 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-203ENST00000434735 ZFXP17010 805 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-203ENST00000434735 ROR1Q01973 937 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 DOK6Q6PKX4 331 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 LENG1Q96BZ8 264 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-203ENST00000434735 DAAM1Q9Y4D1 1078 aa12.74□□□□□ -0.37
UBE3B-203ENST00000434735 CLTBP09497 229 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 FGFR1P11362 822 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 MLLT1Q03111 559 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 ELF2Q15723 593 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 SERPINA13PQ6UXR4 307 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 LRRC8DQ7L1W4 858 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 SLC30A5Q8TAD4 765 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 WTIPA6NIX2 430 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 GOLGA8KD6RF30 607 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 BRD2P25440 801 aaKnown RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 PABPC1LQ4VXU2 614 aaKnown RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 SCLYQ96I15 445 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 CCDC138Q96M89 665 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 PURBQ96QR8 312 aaKnown RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 CELF4Q9BZC1 486 aaKnown RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 BCL2L12Q9HB09 334 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 JRKLQ9Y4A0 524 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 ATP5BP06576 529 aaKnown RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 LAG3P18627 525 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 YWHAQP27348 245 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 CYP2C18P33260 490 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 CELF3Q5SZQ8 465 aaKnown RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 C12orf50Q8NA57 414 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 PPHLN1Q8NEY8 458 aaKnown RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 CXorf38Q8TB03 319 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 IGDCC4Q8TDY8 1250 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 ATXN7L3BQ96GX2 97 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 RWDD3Q9Y3V2 267 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 SNCAIPQ9Y6H5 919 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 TACO1Q9BSH4 297 aaKnown RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 NHEJ1Q9H9Q4 299 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 GGT7Q9UJ14 662 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 MT-ND3P03897 115 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 GTF2H1P32780 548 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 RFX5P48382 616 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-203ENST00000434735 GPM6BQ13491 265 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 RCN2Q14257 317 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 SPDYE7PQ495Y7 208 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 GPAT2Q6NUI2 795 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 VMP1Q96GC9 406 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 MYOCQ99972 504 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 TEX12Q9BXU0 123 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 VPS11Q9H270 941 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 KLF15Q9UIH9 416 aa12.73□□□□□ -0.37
UBE3B-203ENST00000434735 PHLPP1O60346 1717 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 UBA1P22314 1058 aaKnown RBP12.72□□□□□ -0.37
UBE3B-203ENST00000434735 RAP1GAPP47736 663 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 RFX3P48380 749 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 HIRAP54198 1017 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-203ENST00000434735 CAPRIN1Q14444 709 aaKnown RBP12.72□□□□□ -0.37
UBE3B-203ENST00000434735 MMS22LQ6ZRQ5 1243 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 IPMKQ8NFU5 416 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 XAB2Q9HCS7 855 aaKnown RBP12.72□□□□□ -0.37
UBE3B-203ENST00000434735 RNF186Q9NXI6 227 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 SRRDQ9UH36 339 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 TBK1Q9UHD2 729 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 PDXKO00764 312 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 SLURP2P0DP57 97 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 RPA1P27694 616 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 SH3BGRP55822 239 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-203ENST00000434735 RESTQ13127 1097 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 PSMD5Q16401 504 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 ERAP2Q6P179 960 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 STOX1Q6ZVD7 989 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 C16orf59Q7L2K0 433 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 CYFIP2Q96F07 1278 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 PNKPQ96T60 521 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 PDGFCQ9NRA1 345 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 ST3GAL5Q9UNP4 418 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 CEMIPQ8WUJ3 1361 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 CCL16O15467 120 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 PEX10O60683 326 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 KIF19Q2TAC6 998 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 GLE1Q53GS7 698 aaKnown RBP12.72□□□□□ -0.37
UBE3B-203ENST00000434735 COBLL1Q53SF7 1204 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 RESP18Q5W5W9 173 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 NEUROG2Q9H2A3 272 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms