RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 BANF1O75531 89 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 SRGAP2CP0DJJ0 459 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 NQO1P15559 274 aaKnown RBP12.45□□□□□ -0.42
CD44-209ENST00000433892 UBA1P22314 1058 aaKnown RBP12.45□□□□□ -0.42
CD44-209ENST00000433892 RPS12P25398 132 aaKnown RBP12.45□□□□□ -0.42
CD44-209ENST00000433892 ICAM3P32942 547 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 CDKN2BP42772 138 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 VCPP55072 806 aaKnown RBP12.45□□□□□ -0.42
CD44-209ENST00000433892 DYNLT1P63172 113 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 MCL1Q07820 350 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 MTFR1Q15390 333 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 OASLQ15646 514 aaKnown RBP12.45□□□□□ -0.42
CD44-209ENST00000433892 PKN2Q16513 984 aaKnown RBP12.45□□□□□ -0.42
CD44-209ENST00000433892 LRRC38Q5VT99 294 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 CEP128Q6ZU80 1094 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 ERICH1Q86X53 443 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 WDR49Q8IV35 697 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 RIBC1Q8N443 379 aaPredicted RBP12.45□□□□□ -0.42
CD44-209ENST00000433892 GBP7Q8N8V2 638 aaPredicted RBP12.45□□□□□ -0.42
CD44-209ENST00000433892 GPATCH11Q8N954 259 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 SPOCK2Q92563 424 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 KLHL29Q96CT2 875 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 YY1AP1Q9H869 796 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 C10orf88Q9H8K7 445 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 RXFP1Q9HBX9 757 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 HOXC10Q9NYD6 342 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 KLHL14Q9P2G3 628 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 TRIM33Q9UPN9 1127 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 DOCK1Q14185 1865 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 IGKV6D-21A0A0A0MT36 114 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 C19orf81C9J6K1 198 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 NFKBIEO00221 500 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 MSCO60682 206 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 ASMTLO95671 621 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 LSM8O95777 96 aaKnown RBP12.45□□□□□ -0.42
CD44-209ENST00000433892 KRT15P19012 456 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 SLC8A1P32418 973 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 RFC5P40937 340 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 DNAJC3Q13217 504 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 MORF4L2Q15014 288 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 TARBP2Q15633 366 aaKnown RBP12.45□□□□□ -0.42
CD44-209ENST00000433892 SMTNL2Q2TAL5 461 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 C4orf33Q8N1A6 199 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 TTC25Q96NG3 672 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 NIF3L1Q9GZT8 377 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 TRABDQ9H4I3 376 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 NRBP2Q9NSY0 501 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 DRG1Q9Y295 367 aaKnown RBP12.45□□□□□ -0.42
CD44-209ENST00000433892 TOM1L1O75674 476 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 FARP2O94887 1054 aaPredicted RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 EZRP15311 586 aaKnown RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 RFC1P35251 1148 aaPredicted RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 ALDH5A1P51649 535 aaPredicted RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 STAT5BP51692 787 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 TFAMQ00059 246 aaKnown RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 PDIA2Q13087 525 aaKnown RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 TRPC3Q13507 836 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 PRKG1Q13976 671 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 PIGHQ14442 188 aaPredicted RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 DUOXA2Q1HG44 320 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 DALRD3Q5D0E6 543 aaKnown RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 KCNT1Q5JUK3 1230 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 RNASEH2BQ5TBB1 312 aaKnown RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 ANGEL2Q5VTE6 544 aaKnown RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 ZPBP2Q6X784 338 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 ECHDC2Q86YB7 292 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 ANKMY2Q8IV38 441 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 PLCD4Q9BRC7 762 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 MRPL4Q9BYD3 311 aaKnown RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 ZWILCHQ9H900 591 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 TJP2Q9UDY2 1190 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 ALOX15BO15296 676 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 PIAS1O75925 651 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 ITGAVP06756 1048 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 KRT16P08779 473 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 MARK3P27448 753 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 RPA3P35244 121 aaPredicted RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 OSTNP61366 133 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 GAD2Q05329 585 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 MTM1Q13496 603 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 ZNF268Q14587 947 aaPredicted RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 SGSM1Q2NKQ1 1148 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 CENPUQ71F23 418 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 EEPD1Q7L9B9 569 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 TAB3Q8N5C8 712 aaPredicted RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 DNERQ8NFT8 737 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 NKD2Q969F2 451 aaPredicted RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 ZNF668Q96K58 619 aaPredicted RBP12.44□□□□□ -0.42
CD44-209ENST00000433892 SLCO1B3Q9NPD5 702 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 GRID1Q9ULK0 1009 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 AGTPBP1Q9UPW5 1226 aa12.44□□□□□ -0.42
CD44-209ENST00000433892 MAFO75444 373 aaPredicted RBP12.43□□□□□ -0.42
CD44-209ENST00000433892 PSMA2P25787 234 aa12.43□□□□□ -0.42
CD44-209ENST00000433892 TCF7P36402 384 aaPredicted RBP12.43□□□□□ -0.42
CD44-209ENST00000433892 AP3M2P53677 418 aa12.43□□□□□ -0.42
CD44-209ENST00000433892 NR1H3Q13133 447 aa12.43□□□□□ -0.42
CD44-209ENST00000433892 NEDD9Q14511 834 aa12.43□□□□□ -0.42
CD44-209ENST00000433892 CCDC142Q17RM4 750 aa12.43□□□□□ -0.42
CD44-209ENST00000433892 ZNF699Q32M78 642 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms