RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 RTN4RL1Q86UN2 441 aaPredicted RBP11.23□□□□□ -0.61
NEFM-202ENST00000433454 ADGRF2Q8IZF7 708 aa11.23□□□□□ -0.61
NEFM-202ENST00000433454 KBTBD7Q8WVZ9 684 aa11.23□□□□□ -0.61
NEFM-202ENST00000433454 TOX2Q96NM4 488 aa11.23□□□□□ -0.61
NEFM-202ENST00000433454 PSMB7Q99436 277 aa11.23□□□□□ -0.61
NEFM-202ENST00000433454 SNX25Q9H3E2 840 aa11.23□□□□□ -0.61
NEFM-202ENST00000433454 HIPK3Q9H422 1215 aa11.23□□□□□ -0.61
NEFM-202ENST00000433454 MRPL47Q9HD33 250 aaKnown RBP11.23□□□□□ -0.61
NEFM-202ENST00000433454 L1RE1Q9UN81 338 aa11.23□□□□□ -0.61
NEFM-202ENST00000433454 PACSIN2Q9UNF0 486 aaPredicted RBP11.23□□□□□ -0.61
NEFM-202ENST00000433454 SCINQ9Y6U3 715 aa11.23□□□□□ -0.61
NEFM-202ENST00000433454 M0QYV0 167 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 MICAL2O94851 1124 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 KIF4AO95239 1232 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 GNL1P36915 607 aaPredicted RBP11.22□□□□□ -0.61
NEFM-202ENST00000433454 DNA2P51530 1060 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 TRIM60Q495X7 471 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 C2CD6Q53TS8 623 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 PLEKHG4Q58EX7 1191 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 C1orf53Q5VUE5 145 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 ACOT1Q86TX2 421 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 NT5DC3Q86UY8 548 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 MSANTD4Q8NCY6 345 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 SEPT8Q92599 483 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 APBB2Q92870 758 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 CAPZA3Q96KX2 299 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 CACNG4Q9UBN1 327 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 AMFRQ9UKV5 643 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 EFCAB8A8MWE9 144 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 CYB561D2O14569 222 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 PARNO95453 639 aaKnown RBP11.22□□□□□ -0.61
NEFM-202ENST00000433454 COL6A1P12109 1028 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 CXCR5P32302 372 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 LBX1P52954 281 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 FAM189BP81408 668 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 TLE2Q04725 743 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 PTP4A2Q12974 167 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 TUSC3Q13454 348 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 UPP1Q16831 310 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 LCLAT1Q6UWP7 414 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 ERICH1Q86X53 443 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 PDCL2Q8N4E4 241 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 ANKLE1Q8NAG6 615 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 LRRN4CLQ8ND94 238 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 DBF4BQ8NFT6 615 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 COG1Q8WTW3 980 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
NEFM-202ENST00000433454 UROC1Q96N76 676 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 ABCB6Q9NP58 842 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 PARVAQ9NVD7 372 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 ANAPC7Q9UJX3 599 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 STRIP2Q9ULQ0 834 aa11.22□□□□□ -0.61
NEFM-202ENST00000433454 CTAGE15A4D2H0 777 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 ZNF185O15231 689 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 TADA3O75528 432 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 CTAGE8P0CG41 777 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 WARSP23381 471 aaKnown RBP11.21□□□□□ -0.61
NEFM-202ENST00000433454 GJA8P48165 433 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 MESDQ14696 234 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 PTPROQ16827 1216 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 PLEKHA7Q6IQ23 1121 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 CTAGE6Q86UF2 777 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 CTAGE4Q8IX94 777 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 WDTC1Q8N5D0 677 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 C12orf29Q8N999 325 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 URGCPQ8TCY9 931 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 DIS3LQ8TF46 1054 aaKnown RBP11.21□□□□□ -0.61
NEFM-202ENST00000433454 TNIP3Q96KP6 325 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 TSPAN16Q9UKR8 245 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 STXBP5LQ9Y2K9 1186 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 NME7Q9Y5B8 376 aa11.21□□□□□ -0.61
NEFM-202ENST00000433454 TMEM110-MUSTN1A8MSY1 372 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 FAM163BP0C2L3 166 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 FGFR1P11362 822 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 FAAP100Q0VG06 881 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 MAMLD1Q13495 774 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 GPNMBQ14956 572 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 GOLGA7BQ2TAP0 167 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 CCDC181Q5TID7 509 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 TMEM86AQ8N2M4 240 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 UBE2Q2Q8WVN8 375 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 HES6Q96HZ4 224 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 SENP8Q96LD8 212 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 PAAF1Q9BRP4 392 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 SYNCQ9H7C4 482 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 TMEM161AQ9NX61 479 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 ALG6Q9Y672 507 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
NEFM-202ENST00000433454 CES2O00748 559 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 DYNC1I1O14576 645 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 KCNK3O14649 394 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 PAX3P23760 479 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 AARSP49588 968 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEFM-202ENST00000433454 CTCFP49711 727 aaPredicted RBP11.2□□□□□ -0.62
NEFM-202ENST00000433454 PDCLQ13371 301 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 PTPN20Q4JDL3 420 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 CLLU1OSQ5K130 101 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 LLGL2Q6P1M3 1020 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 DNAJC24Q6P3W2 148 aa11.2□□□□□ -0.62
NEFM-202ENST00000433454 DSTYKQ6XUX3 929 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms