RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.06■□□□□ 0.16
SF1-209ENST00000433274 IFT81Q8WYA0 676 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 MCEEQ96PE7 176 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 GDF3Q9NR23 364 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 TJP2Q9UDY2 1190 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 ST3GAL5Q9UNP4 418 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 SCN1AP35498 2009 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 CHRNA1P02708 482 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 VDRP11473 427 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 SSR1P43307 286 aaKnown RBP16.06■□□□□ 0.16
SF1-209ENST00000433274 CARSP49589 748 aaKnown RBP16.06■□□□□ 0.16
SF1-209ENST00000433274 TRADDQ15628 312 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 SGO2Q562F6 1265 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 DCUN1D2Q6PH85 259 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 LRRC52Q8N7C0 313 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 AENQ8WTP8 325 aaKnown RBP16.06■□□□□ 0.16
SF1-209ENST00000433274 MRPL45Q9BRJ2 306 aaKnown RBP16.06■□□□□ 0.16
SF1-209ENST00000433274 NT5C1AQ9BXI3 368 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 SLITRK6Q9H5Y7 841 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 GOLGA2P5Q9HBQ8 144 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.06■□□□□ 0.16
SF1-209ENST00000433274 CASP8AP2Q9UKL3 1982 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 TCRBV5S1A1TA0A578 114 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 TMEM191CA6NGB0 347 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 PTGISQ16647 500 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 CCSAPQ6IQ19 270 aaPredicted RBP16.05■□□□□ 0.16
SF1-209ENST00000433274 TTC39CQ8N584 583 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 CASKIN2Q8WXE0 1202 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 SENP6Q9GZR1 1112 aaPredicted RBP16.05■□□□□ 0.16
SF1-209ENST00000433274 CREBZFQ9NS37 354 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 IP6K2Q9UHH9 426 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 GRIN2DO15399 1336 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 TCRBV7S2A1N4TA0A589 114 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 GOLGA8SH3BPF8 625 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 O00370 1275 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 CD4P01730 458 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 HMGCRP04035 888 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 KCNE1P15382 129 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 ATF7P17544 494 aaPredicted RBP16.05■□□□□ 0.16
SF1-209ENST00000433274 HOXD10P28358 340 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 TNFRSF8P28908 595 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 GJC1P36383 396 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 THPOP40225 353 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 SOX4Q06945 474 aaPredicted RBP16.05■□□□□ 0.16
SF1-209ENST00000433274 CNGA2Q16280 664 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 XKR4Q5GH76 650 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 C12orf29Q8N999 325 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 CCDC26Q8TAB7 109 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 UBA3Q8TBC4 463 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 CPXM1Q96SM3 734 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 SYNCQ9H7C4 482 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 NFU1Q9UMS0 254 aa16.05■□□□□ 0.16
SF1-209ENST00000433274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.05■□□□□ 0.16
SF1-209ENST00000433274 TTI1O43156 1089 aa16.04■□□□□ 0.16
SF1-209ENST00000433274 XPOTO43592 962 aaKnown RBP16.04■□□□□ 0.16
SF1-209ENST00000433274 TAS2R40P59535 323 aa16.04■□□□□ 0.16
SF1-209ENST00000433274 FBXO47Q5MNV8 452 aa16.04■□□□□ 0.16
SF1-209ENST00000433274 SND1Q7KZF4 910 aaKnown RBP eCLIP16.04■□□□□ 0.16
SF1-209ENST00000433274 MAATS1Q7Z4T9 603 aa16.04■□□□□ 0.16
SF1-209ENST00000433274 SLC13A5Q86YT5 568 aaPredicted RBP16.04■□□□□ 0.16
SF1-209ENST00000433274 ZDHHC14Q8IZN3 488 aa16.04■□□□□ 0.16
SF1-209ENST00000433274 C3orf20Q8ND61 904 aa16.04■□□□□ 0.16
SF1-209ENST00000433274 RAET1EQ8TD07 263 aa16.04■□□□□ 0.16
SF1-209ENST00000433274 ZFP42Q96MM3 310 aa16.04■□□□□ 0.16
SF1-209ENST00000433274 PLVAPQ9BX97 442 aa16.04■□□□□ 0.16
SF1-209ENST00000433274 STRIP2Q9ULQ0 834 aa16.04■□□□□ 0.16
SF1-209ENST00000433274 PIRO00625 290 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 CYP3A5P20815 502 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 CST5P28325 142 aaPredicted RBP16.03■□□□□ 0.16
SF1-209ENST00000433274 EPHB4P54760 987 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 PSMC1P62191 440 aaKnown RBP16.03■□□□□ 0.16
SF1-209ENST00000433274 ACOT1Q86TX2 421 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 PCSK9Q8NBP7 692 aaKnown RBP16.03■□□□□ 0.16
SF1-209ENST00000433274 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 DDX27Q96GQ7 796 aaKnown RBP16.03■□□□□ 0.16
SF1-209ENST00000433274 FAM124BQ9H5Z6 455 aaPredicted RBP16.03■□□□□ 0.16
SF1-209ENST00000433274 DDX20Q9UHI6 824 aaKnown RBP16.03■□□□□ 0.16
SF1-209ENST00000433274 TSPAN16Q9UKR8 245 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 BRCA2P51587 3418 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 MEIS3P2A8K0S8 358 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 ERBB2P04626 1255 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 HSPA6P17066 643 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 GPD2P43304 727 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 OGDHQ02218 1023 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 MGAT3Q09327 533 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 ZNF252P-AS1Q0IIN9 211 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 SOWAHAQ2M3V2 549 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 PPP1R15BQ5SWA1 713 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 RHOT1Q8IXI2 618 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 PRELID2Q8N945 189 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 OR6B3Q8NGW1 331 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 OSBPL7Q9BZF2 842 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
SF1-209ENST00000433274 KPNA7A9QM74 516 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 SPTLC1O15269 473 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 MAN1A1P33908 653 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 TAP1Q03518 808 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 PAK2Q13177 524 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 MAP3K21Q5TCX8 1036 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 RNF180Q86T96 592 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms