RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 FCGRTP55899 365 aa20.73■□□□□ 0.91
VRK2-205ENST00000432057 INCA1Q0VD86 236 aa20.73■□□□□ 0.91
VRK2-205ENST00000432057 PPP1R15BQ5SWA1 713 aa20.73■□□□□ 0.91
VRK2-205ENST00000432057 PAXIP1Q6ZW49 1069 aaPredicted RBP20.73■□□□□ 0.91
VRK2-205ENST00000432057 JAMLQ86YT9 394 aa20.73■□□□□ 0.91
VRK2-205ENST00000432057 RHOT1Q8IXI2 618 aa20.73■□□□□ 0.91
VRK2-205ENST00000432057 EIF1ADQ8N9N8 165 aaKnown RBP20.73■□□□□ 0.91
VRK2-205ENST00000432057 HERPUD2Q9BSE4 406 aa20.73■□□□□ 0.91
VRK2-205ENST00000432057 LHX5Q9H2C1 402 aa20.73■□□□□ 0.91
VRK2-205ENST00000432057 FAN1Q9Y2M0 1017 aa20.73■□□□□ 0.91
VRK2-205ENST00000432057 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.73■□□□□ 0.91
VRK2-205ENST00000432057 MICAL2O94851 1124 aa20.72■□□□□ 0.91
VRK2-205ENST00000432057 GYS2P54840 703 aa20.72■□□□□ 0.91
VRK2-205ENST00000432057 OGDHQ02218 1023 aa20.72■□□□□ 0.91
VRK2-205ENST00000432057 CYP1B1Q16678 543 aa20.72■□□□□ 0.91
VRK2-205ENST00000432057 RAB17Q9H0T7 212 aa20.72■□□□□ 0.91
VRK2-205ENST00000432057 BARX2Q9UMQ3 279 aaPredicted RBP20.72■□□□□ 0.91
VRK2-205ENST00000432057 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.72■□□□□ 0.91
VRK2-205ENST00000432057 FAM187AA6NFU0 413 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 FSCN2O14926 492 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 GNAT1P11488 350 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 CRYBB1P53674 252 aaPredicted RBP20.71■□□□□ 0.91
VRK2-205ENST00000432057 MYO1EQ12965 1108 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 UBXN11Q5T124 520 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 DCUN1D2Q6PH85 259 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 CCDC137Q6PK04 289 aaKnown RBP20.71■□□□□ 0.91
VRK2-205ENST00000432057 MREGQ8N565 214 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 C3orf20Q8ND61 904 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.71■□□□□ 0.91
VRK2-205ENST00000432057 HHIPL1Q96JK4 782 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 FAM114A2Q9NRY5 505 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 CNTN3Q9P232 1028 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 VPS18Q9P253 973 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 PCYOX1Q9UHG3 505 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 GOLGA8SH3BPF8 625 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 M0QYV0 167 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 TCF4P15884 667 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 GJA9P57773 515 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 TRIM32Q13049 653 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 TERF2Q15554 542 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 ZBTB6Q15916 424 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 GNASQ5JWF2 1037 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 ALKAL1Q6UXT8 129 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 DPH6Q7L8W6 267 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 CCDC50Q8IVM0 306 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 C12orf50Q8NA57 414 aaPredicted RBP20.71■□□□□ 0.91
VRK2-205ENST00000432057 BEST2Q8NFU1 509 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 HEXIM2Q96MH2 286 aaKnown RBP20.71■□□□□ 0.91
VRK2-205ENST00000432057 CPXM1Q96SM3 734 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 ERP44Q9BS26 406 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 KLK14Q9P0G3 267 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 STRIP2Q9ULQ0 834 aa20.71■□□□□ 0.91
VRK2-205ENST00000432057 TMEM88BA6NKF7 163 aa20.7■□□□□ 0.9
VRK2-205ENST00000432057 PGK1P00558 417 aa20.7■□□□□ 0.9
VRK2-205ENST00000432057 VDRP11473 427 aa20.7■□□□□ 0.9
VRK2-205ENST00000432057 COILP38432 576 aaPredicted RBP20.7■□□□□ 0.9
VRK2-205ENST00000432057 FLT3LGP49771 235 aa20.7■□□□□ 0.9
VRK2-205ENST00000432057 MFSD14CQ5VZR4 134 aa20.7■□□□□ 0.9
VRK2-205ENST00000432057 DUPD1Q68J44 220 aa20.7■□□□□ 0.9
VRK2-205ENST00000432057 CYP4F22Q6NT55 531 aa20.7■□□□□ 0.9
VRK2-205ENST00000432057 KATNAL2Q8IYT4 538 aa20.7■□□□□ 0.9
VRK2-205ENST00000432057 MTG1Q9BT17 334 aaPredicted RBP20.7■□□□□ 0.9
VRK2-205ENST00000432057 RASAL2Q9UJF2 1139 aa20.7■□□□□ 0.9
VRK2-205ENST00000432057 HSF2BPO75031 334 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 RNF40O75150 1001 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 TOMM70O94826 608 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 CYP3A5P20815 502 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 CENPFP49454 3210 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 TAP1Q03518 808 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 SGO2Q562F6 1265 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 CXCL17Q6UXB2 119 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 NME8Q8N427 588 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 RNF39Q9H2S5 420 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 KLHL11Q9NVR0 708 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 SNX9Q9Y5X1 595 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 F8VP50 259 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 ERBB2P04626 1255 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 HSPA9P38646 679 aaKnown RBP20.69■□□□□ 0.9
VRK2-205ENST00000432057 KCNJ1P48048 391 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 PSMC1P62191 440 aaKnown RBP20.69■□□□□ 0.9
VRK2-205ENST00000432057 PRKCZQ05513 592 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 C1orf54Q8WWF1 131 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 ZIM3Q96PE6 472 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 MRPL45Q9BRJ2 306 aaKnown RBP20.69■□□□□ 0.9
VRK2-205ENST00000432057 PARP2Q9UGN5 583 aa20.69■□□□□ 0.9
VRK2-205ENST00000432057 KPNA6O60684 536 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 RALAP11233 206 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 FLT3P36888 993 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 FNTAP49354 379 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 CNGA2Q16280 664 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 NBPF20Q3BBV1 942 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 C9orf57Q5W0N0 161 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 ALS2CLQ60I27 953 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 FAM228AQ86W67 206 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 XYLT1Q86Y38 959 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 CCDC105Q8IYK2 499 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 JOSD2Q8TAC2 188 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 UBA3Q8TBC4 463 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 NT5C1AQ9BXI3 368 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 UPF3AQ9H1J1 476 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms