RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 P4HA1P13674 534 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 CTCFP49711 727 aaPredicted RBP13.6□□□□□ -0.23
DDX56-204ENST00000431640 PURAQ00577 322 aaKnown RBP13.6□□□□□ -0.23
DDX56-204ENST00000431640 SLMAPQ14BN4 828 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 ARHGEF6Q15052 776 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 FSCN1Q16658 493 aaKnown RBP13.6□□□□□ -0.23
DDX56-204ENST00000431640 AGBL2Q5U5Z8 902 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 EEF1DP3Q658K8 133 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 MTHFD1LQ6UB35 978 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 KDM7AQ6ZMT4 941 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 CTU1Q7Z7A3 348 aaKnown RBP13.6□□□□□ -0.23
DDX56-204ENST00000431640 ERICH1Q86X53 443 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 PASD1Q8IV76 773 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 RCOR2Q8IZ40 523 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 TTC39CQ8N584 583 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 KLHDC9Q8NEP7 349 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 EXD1Q8NHP7 514 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 DDX27Q96GQ7 796 aaKnown RBP13.6□□□□□ -0.23
DDX56-204ENST00000431640 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.6□□□□□ -0.239e-6■■□□□ 13.2
DDX56-204ENST00000431640 XYLT2Q9H1B5 865 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 LHX5Q9H2C1 402 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 TUT1Q9H6E5 874 aaKnown RBP13.6□□□□□ -0.23
DDX56-204ENST00000431640 XPNPEP3Q9NQH7 507 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 AKT3Q9Y243 479 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 SNX24Q9Y343 169 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 NFS1Q9Y697 457 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 A0A087WZ62 844 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 TMEM191CA6NGB0 347 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 RRN3P2A6NIE6 340 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 B4GALT5O43286 388 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 CFHP08603 1231 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 RARBP10826 455 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 CD58P19256 250 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 ITIH2P19823 946 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 ASPAP45381 313 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 PLTPP55058 493 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 CALCOCO2Q13137 446 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 PIGHQ14442 188 aaPredicted RBP13.59□□□□□ -0.23
DDX56-204ENST00000431640 UAP1Q16222 522 aaPredicted RBP13.59□□□□□ -0.23
DDX56-204ENST00000431640 DGKDQ16760 1214 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 TTC27Q6P3X3 843 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 ZNF410Q86VK4 478 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 ZDHHC14Q8IZN3 488 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 ATL2Q8NHH9 583 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 FDXACB1Q9BRP7 624 aaPredicted RBP13.59□□□□□ -0.23
DDX56-204ENST00000431640 BCO2Q9BYV7 579 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 TXLNGYQ9BZA5 131 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 MINDY3Q9H8M7 445 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 VRTNQ9H8Y1 702 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 CYP3A43Q9HB55 503 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 PAK6Q9NQU5 681 aaPredicted RBP13.59□□□□□ -0.23
DDX56-204ENST00000431640 WHRNQ9P202 907 aa13.59□□□□□ -0.23
DDX56-204ENST00000431640 LACTBL1A8MY62 500 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 HAS3O00219 553 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 GAS8O95995 478 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 GJB1P08034 283 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 KRT19P08727 400 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 WEE2P0C1S8 567 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 FLT3P36888 993 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 IRAK1P51617 712 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 PMS2P54278 862 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 HNRNPH2P55795 449 aaKnown RBP13.58□□□□□ -0.23
DDX56-204ENST00000431640 OSTNP61366 133 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 CAV1Q03135 178 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 LMNB2Q03252 620 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 PPP1R7Q15435 360 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 CCNG2Q16589 344 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 AMHR2Q16671 573 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 DNAJC24Q6P3W2 148 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 PHLDB2Q86SQ0 1253 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 CPNE8Q86YQ8 564 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 ART4Q93070 314 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 RBM41Q96IZ5 413 aaKnown RBP13.58□□□□□ -0.23
DDX56-204ENST00000431640 ADPGKQ9BRR6 497 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 AP5M1Q9H0R1 490 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 PABPC3Q9H361 631 aaKnown RBP13.58□□□□□ -0.23
DDX56-204ENST00000431640 WDR35Q9P2L0 1181 aa13.58□□□□□ -0.23
DDX56-204ENST00000431640 TCRBV7S2A1N4TA0A589 114 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 MYL3P08590 195 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 IQCF3P0C7M6 154 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 CXCL8P10145 99 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 BRD2P25440 801 aaKnown RBP13.58□□□□□ -0.24
DDX56-204ENST00000431640 CST5P28325 142 aaPredicted RBP13.58□□□□□ -0.24
DDX56-204ENST00000431640 RPL21P46778 160 aaKnown RBP13.58□□□□□ -0.24
DDX56-204ENST00000431640 CPT1AP50416 773 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 COPS2P61201 443 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 ZNF844Q08AG5 666 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 IFFO1Q0D2I5 559 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 PCBP1Q15365 356 aaKnown RBP eCLIP13.58□□□□□ -0.24
DDX56-204ENST00000431640 WDR72Q3MJ13 1102 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 DCUN1D2Q6PH85 259 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 FBXO46Q6PJ61 603 aaPredicted RBP13.58□□□□□ -0.24
DDX56-204ENST00000431640 ZDHHC24Q6UX98 284 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 CXCL17Q6UXB2 119 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 CCDC50Q8IVM0 306 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 BBOF1Q8ND07 529 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 TRIM7Q9C029 511 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 PDZD7Q9H5P4 517 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 HMX1Q9NP08 348 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms