RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 DDX17Q92841 729 aaKnown RBP6.04□□□□□ -1.44
PTPN4-204ENST00000431283 SLC13A1Q9BZW2 595 aa6.04□□□□□ -1.44
PTPN4-204ENST00000431283 WDCPQ9H6R7 721 aa6.04□□□□□ -1.44
PTPN4-204ENST00000431283 PCDHA3Q9Y5H8 950 aa6.04□□□□□ -1.44
PTPN4-204ENST00000431283 ABCC8Q09428 1581 aa6.04□□□□□ -1.44
PTPN4-204ENST00000431283 ZNF608Q9ULD9 1512 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-204ENST00000431283 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 WDR27A2RRH5 827 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 VWC2LB2RUY7 222 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 SLC16A6O15403 523 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 SNUPNO95149 360 aaKnown RBP6.03□□□□□ -1.44
PTPN4-204ENST00000431283 CHRM3P20309 590 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 PHKA1P46020 1223 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 ALDH9A1P49189 494 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 CDKN1CP49918 316 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-204ENST00000431283 ZNF81P51508 661 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 LLGL1Q15334 1064 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 TAF2Q6P1X5 1199 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 GLCCI1Q86VQ1 547 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 CPA6Q8N4T0 437 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 DDB2Q92466 427 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 FAM136AQ96C01 138 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 SMAD5Q99717 465 aaKnown RBP6.03□□□□□ -1.44
PTPN4-204ENST00000431283 SMOC2Q9H3U7 446 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 GPR35Q9HC97 309 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 SPEF1Q9Y4P9 236 aa6.03□□□□□ -1.44
PTPN4-204ENST00000431283 CCDC88BA6NC98 1476 aa6.02□□□□□ -1.44
PTPN4-204ENST00000431283 LRRC14BA6NHZ5 514 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 NT5C1B-RDH14C9J2C7 533 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 FZD9O00144 591 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 KIF20AO95235 890 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 ERBB2P04626 1255 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 HNRNPCP07910 306 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTPN4-204ENST00000431283 LPOP22079 712 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-204ENST00000431283 ITPKBP27987 946 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 PRDX5P30044 214 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 DSC2Q02487 901 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 KIF22Q14807 665 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 TMEM119Q4V9L6 283 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 CCDC157Q569K6 752 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 ZNF551Q7Z340 670 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-204ENST00000431283 PRPF38AQ8NAV1 312 aaKnown RBP6.02□□□□□ -1.45
PTPN4-204ENST00000431283 RGMAQ96B86 450 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 AMBRA1Q9C0C7 1298 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 TINAGL1Q9GZM7 467 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-204ENST00000431283 ETAA1Q9NY74 926 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 ABCF2Q9UG63 623 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 ZDHHC8Q9ULC8 765 aa6.02□□□□□ -1.45
PTPN4-204ENST00000431283 ARHGEF11O15085 1522 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 TOPBP1Q92547 1522 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 FTLP02792 175 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-204ENST00000431283 DRD4P21917 467 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 RECQLP46063 649 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-204ENST00000431283 NOGQ13253 232 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 LAYNQ6UX15 382 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 HEATR3Q7Z4Q2 680 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 ANKS1AQ92625 1134 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 RFKQ969G6 155 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 NELL2Q99435 816 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 C1orf43Q9BWL3 253 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 WDR26Q9H7D7 661 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 ARHGEF3Q9NR81 526 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 ADAM21Q9UKJ8 722 aa6.01□□□□□ -1.45
PTPN4-204ENST00000431283 RIMBP3CA6NJZ7 1639 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 RIMBP3BA6NNM3 1639 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 RIMBP3Q9UFD9 1639 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 WDR91A4D1P6 747 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 CGB1A6NKQ9 187 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 LINC01548A6NM66 108 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 M0QYG6 137 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 QSOX1O00391 747 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 CELA2AP08217 269 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 FAM163BP0C2L3 166 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 GCLCP48506 637 aaPredicted RBP6□□□□□ -1.45
PTPN4-204ENST00000431283 FXR1P51114 621 aaKnown RBP eCLIP6□□□□□ -1.45
PTPN4-204ENST00000431283 EIF2B5Q13144 721 aaKnown RBP6□□□□□ -1.45
PTPN4-204ENST00000431283 ODF1Q14990 250 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 ZNF618Q5T7W0 954 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 CEP85Q6P2H3 762 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 SLC29A4Q7RTT9 530 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 USP37Q86T82 979 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 SEMA6DQ8NFY4 1073 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 SCARB1Q8WTV0 552 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 DPF1Q92782 380 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 FAM167AQ96KS9 214 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6□□□□□ -1.45
PTPN4-204ENST00000431283 LMBRD1Q9NUN5 540 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 FLRT1Q9NZU1 646 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 SBNO2Q9Y2G9 1366 aa6□□□□□ -1.45
PTPN4-204ENST00000431283 AQRO60306 1485 aaKnown RBP eCLIP5.99□□□□□ -1.45
PTPN4-204ENST00000431283 TARM1B6A8C7 271 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 PDCP20941 246 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 KRTAP10-11P60412 298 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 SFRP4Q6FHJ7 346 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-204ENST00000431283 ZNF804AQ7Z570 1209 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 FAM90A1Q86YD7 464 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 FANCBQ8NB91 859 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 KLHDC4Q8TBB5 520 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 NRIP3Q9NQ35 241 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 SERTAD4Q9NUC0 356 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms