RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 KRT10P13645 584 aa11.97□□□□□ -0.49
SMPD4-205ENST00000431183 TCF4P15884 667 aa11.97□□□□□ -0.49
SMPD4-205ENST00000431183 GOLGA7BQ2TAP0 167 aa11.97□□□□□ -0.49
SMPD4-205ENST00000431183 DNAJC21Q5F1R6 531 aaKnown RBP11.97□□□□□ -0.49
SMPD4-205ENST00000431183 PPP6R3Q5H9R7 873 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-205ENST00000431183 HP1BP3Q5SSJ5 553 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-205ENST00000431183 TAF2Q6P1X5 1199 aa11.97□□□□□ -0.49
SMPD4-205ENST00000431183 ZNF410Q86VK4 478 aa11.97□□□□□ -0.49
SMPD4-205ENST00000431183 MRRFQ96E11 262 aaKnown RBP11.97□□□□□ -0.49
SMPD4-205ENST00000431183 PNKPQ96T60 521 aa11.97□□□□□ -0.49
SMPD4-205ENST00000431183 CALN1Q9BXU9 219 aa11.97□□□□□ -0.49
SMPD4-205ENST00000431183 LRFN2Q9ULH4 789 aa11.97□□□□□ -0.49
SMPD4-205ENST00000431183 EFCAB8A8MWE9 144 aa11.96□□□□□ -0.49
SMPD4-205ENST00000431183 CYB561D2O14569 222 aa11.96□□□□□ -0.49
SMPD4-205ENST00000431183 SPTLC1O15269 473 aa11.96□□□□□ -0.49
SMPD4-205ENST00000431183 MGEA5O60502 916 aa11.96□□□□□ -0.49
SMPD4-205ENST00000431183 CRYBB1P53674 252 aaPredicted RBP11.96□□□□□ -0.49
SMPD4-205ENST00000431183 CFAP221Q4G0U5 840 aa11.96□□□□□ -0.49
SMPD4-205ENST00000431183 CAPN12Q6ZSI9 719 aa11.96□□□□□ -0.49
SMPD4-205ENST00000431183 SAE1Q9UBE0 346 aaPredicted RBP11.96□□□□□ -0.49
SMPD4-205ENST00000431183 NOCTQ9UK39 431 aaKnown RBP11.96□□□□□ -0.49
SMPD4-205ENST00000431183 TSPAN16Q9UKR8 245 aa11.96□□□□□ -0.49
SMPD4-205ENST00000431183 NR2E1Q9Y466 385 aa11.96□□□□□ -0.49
SMPD4-205ENST00000431183 A0A1W2PQ45 241 aaPredicted RBP11.96□□□□□ -0.5
SMPD4-205ENST00000431183 A0A1W2PQY0 241 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 LRRD1A4D1F6 860 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 F8VP50 259 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 H3BQF6 201 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 TBXAS1P24557 533 aaPredicted RBP11.96□□□□□ -0.5
SMPD4-205ENST00000431183 GNL1P36915 607 aaPredicted RBP11.96□□□□□ -0.5
SMPD4-205ENST00000431183 GJA9P57773 515 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 FBXO47Q5MNV8 452 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 FOXR1Q6PIV2 292 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 TMEM35BQ8NCS4 154 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 PRUNE2Q8WUY3 3088 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 SYN2Q92777 582 aaPredicted RBP11.96□□□□□ -0.5
SMPD4-205ENST00000431183 WDR90Q96KV7 1748 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 ZSWIM1Q9BR11 485 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 PTPRHQ9HD43 1115 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 METTL5Q9NRN9 209 aaKnown RBP11.96□□□□□ -0.5
SMPD4-205ENST00000431183 P4HA2O15460 535 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 KIF4AO95239 1232 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 THP07101 528 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 ACRP10323 421 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 DNAJB2P25686 324 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 KCNJ6P48051 423 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 APPL2Q8NEU8 664 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 SLC2A14Q8TDB8 520 aa11.96□□□□□ -0.5
SMPD4-205ENST00000431183 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.96□□□□□ -0.51e-6■■■■■ 32
SMPD4-205ENST00000431183 DMGDHQ9UI17 866 aaKnown RBP11.96□□□□□ -0.5
SMPD4-205ENST00000431183 ZSWIM8A7E2V4 1837 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 A0A0C4DFX4 3053 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 CITO14578 2027 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 ABLIM1O14639 778 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 ADAMTS4O75173 837 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 PSMA2P25787 234 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 ACTN2P35609 894 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 BPIFB4P59827 614 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 SNRPFP62306 86 aaKnown RBP11.95□□□□□ -0.5
SMPD4-205ENST00000431183 VSNL1P62760 191 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 GCNT1Q02742 428 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 PTPN11Q06124 597 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-205ENST00000431183 SGO2Q562F6 1265 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 PPP1R26Q5T8A7 1209 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-205ENST00000431183 APBB1IPQ7Z5R6 666 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-205ENST00000431183 SPATA4Q8NEY3 305 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 KPNA7A9QM74 516 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 IL18RAPO95256 599 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 LBX1P52954 281 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 SURF1Q15526 300 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 RAB6CQ53S08 254 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 SH3PXD2AQ5TCZ1 1133 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 GSTA5Q7RTV2 222 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 ALG3Q92685 438 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 EMID1Q96A84 441 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-205ENST00000431183 PIWIL1Q96J94 861 aaKnown RBP11.95□□□□□ -0.5
SMPD4-205ENST00000431183 NT5C1AQ9BXI3 368 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 RAB6CQ9H0N0 254 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 EPB41L5Q9HCM4 733 aa11.95□□□□□ -0.5
SMPD4-205ENST00000431183 TCRBV7S2A1N4TA0A589 114 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 ASPAP45381 313 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 C15orf59Q2T9L4 293 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-205ENST00000431183 MDH1BQ5I0G3 518 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 ACAD10Q6JQN1 1059 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 CCDC105Q8IYK2 499 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 CLEC4CQ8WTT0 213 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 TRIM51Q9BSJ1 452 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 XYLT2Q9H1B5 865 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 TSPYL2Q9H2G4 693 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-205ENST00000431183 E5RJQ4 531 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 ITGB1P05556 798 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 PRKCIP41743 596 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 CDK17Q00537 523 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 NME3Q13232 169 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 NFIL3Q16649 462 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 TMEM176AQ96HP8 235 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 CPXM1Q96SM3 734 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 STYXL1Q9Y6J8 313 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 ARL5CA6NH57 179 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 FAM189A1O60320 539 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms