RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 NUP62CLQ9H1M0 184 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 HCN4Q9Y3Q4 1203 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 C5orf42Q9H799 3197 aa18.63■□□□□ 0.57
CTDSP1-203ENST00000431127 TRIM49BA6NDI0 452 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 PRR33A8MZF0 331 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 C2CD4DB7Z1M9 353 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 TACC1O75410 805 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 P4HA1P13674 534 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 WARSP23381 471 aaKnown RBP18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 SP100P23497 879 aaPredicted RBP18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 FSHRP23945 695 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 ALDH1A3P47895 512 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 TUFMP49411 452 aaKnown RBP18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 NFE2Q16621 373 aaPredicted RBP18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 C1orf220Q5T0J3 134 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 IQCEQ6IPM2 695 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 ATAD1Q8NBU5 361 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 SPPL2BQ8TCT7 592 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 SNX25Q9H3E2 840 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 TMEM8AQ9HCN3 771 aa18.62■□□□□ 0.57
CTDSP1-203ENST00000431127 CLSTN1O94985 981 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 VNN1O95497 513 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 TRIM49P0CI25 452 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 TRIM49CP0CI26 452 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 PTPN2P17706 415 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 PIK3CAP42336 1068 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 GCLMP48507 274 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 EPHB3P54753 998 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 TWF1Q12792 350 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 PAK1Q13153 545 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 PABPC1LQ4VXU2 614 aaKnown RBP18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 ZNF667Q5HYK9 610 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 TTI2Q6NXR4 508 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 ZNF512Q96ME7 567 aaPredicted RBP18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 IMPG2Q9BZV3 1241 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 METTL14Q9HCE5 456 aaKnown RBP18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 NXF1Q9UBU9 619 aaKnown RBP18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 CDH9Q9ULB4 789 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 YIPF1Q9Y548 306 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 PCDHB5Q9Y5E4 795 aa18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 ZFP37Q9Y6Q3 630 aaPredicted RBP18.61■□□□□ 0.57
CTDSP1-203ENST00000431127 TSC2P49815 1807 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 DCXO43602 365 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 VNN2O95498 520 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 GBP2P32456 591 aaPredicted RBP18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 GNL1P36915 607 aaPredicted RBP18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 PPP3CAQ08209 521 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 MAPRE1Q15691 268 aaKnown RBP18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 INTS6LQ5JSJ4 861 aaKnown RBP18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 KRT39Q6A163 491 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 FILIP1Q7Z7B0 1213 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 LRRTM3Q86VH5 581 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 MLKLQ8NB16 471 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 LEMD2Q8NC56 503 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 CCDC150Q8NCX0 1101 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 KBTBD7Q8WVZ9 684 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 ABCB6Q9NP58 842 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 AVENQ9NQS1 362 aaPredicted RBP18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 DNMT3BQ9UBC3 853 aaKnown RBP18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 ARMCX3Q9UH62 379 aaPredicted RBP18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 CTNND2Q9UQB3 1225 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 SLC27A5Q9Y2P5 690 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 ASB3Q9Y575 518 aa18.6■□□□□ 0.57
CTDSP1-203ENST00000431127 C2orf16Q68DN1 1984 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 ZNF197O14709 1029 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 FGFR1OPO95684 399 aaKnown RBP18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 GNA14O95837 355 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 ASS1P00966 412 aaKnown RBP18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 HLA-DRAP01903 254 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 RHOP08100 348 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 ACAT1P24752 427 aaKnown RBP18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 MGAT5BQ3V5L5 792 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 CYP4A22Q5TCH4 519 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 TCERG1LQ5VWI1 586 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 GET4Q7L5D6 327 aaPredicted RBP18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 FRMD5Q7Z6J6 570 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 OSTM1Q86WC4 334 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 OR6B3Q8NGW1 331 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 SEPT5Q99719 369 aaPredicted RBP18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 DUSP9Q99956 384 aaKnown RBP18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 CORO1BQ9BR76 489 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 CRISPLD1Q9H336 500 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 HCFC1R1Q9NWW0 138 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 ABI2Q9NYB9 513 aaPredicted RBP18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 EPS15L1Q9UBC2 864 aa18.59■□□□□ 0.57
CTDSP1-203ENST00000431127 MXI1P50539 228 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 NTHL1P78549 312 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 VEPH1Q14D04 833 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 DCAF17Q5H9S7 520 aaPredicted RBP18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 FAM171BQ6P995 826 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 C4orf50Q6ZRC1 276 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 ITIH5Q86UX2 942 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 TAS1R2Q8TE23 839 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 PKMYT1Q99640 499 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 SYT15Q9BQS2 421 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 MRPL45Q9BRJ2 306 aaKnown RBP18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 MMRN2Q9H8L6 949 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 CEP72Q9P209 647 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 LIMD1Q9UGP4 676 aa18.58■□□□□ 0.56
CTDSP1-203ENST00000431127 RWDD2AQ9UIY3 292 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms