RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 LRRC3Q9BY71 257 aa18.69■□□□□ 0.58
CTSD-203ENST00000429746 POLIQ9UNA4 740 aa18.69■□□□□ 0.58
CTSD-203ENST00000429746 YIPF1Q9Y548 306 aa18.69■□□□□ 0.58
CTSD-203ENST00000429746 GREB1Q4ZG55 1949 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 TULP1O00294 542 aaPredicted RBP18.68■□□□□ 0.58
CTSD-203ENST00000429746 PSMA7O14818 248 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 SLC16A3O15427 465 aaKnown RBP18.68■□□□□ 0.58
CTSD-203ENST00000429746 HUS1O60921 280 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 TACC1O75410 805 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 ASS1P00966 412 aaKnown RBP18.68■□□□□ 0.58
CTSD-203ENST00000429746 ACAT1P24752 427 aaKnown RBP18.68■□□□□ 0.58
CTSD-203ENST00000429746 ATICP31939 592 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 GCLMP48507 274 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 MYO1EQ12965 1108 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 DUSP4Q13115 394 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 SLC5A9Q2M3M2 681 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 RBM43Q6ZSC3 357 aaKnown RBP18.68■□□□□ 0.58
CTSD-203ENST00000429746 TRIM67Q6ZTA4 783 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 CCDC149Q6ZUS6 474 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 PLCD3Q8N3E9 789 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 TAS1R2Q8TE23 839 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 NELFBQ8WX92 580 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 ACBD6Q9BR61 282 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 CYP4F11Q9HBI6 524 aa18.68■□□□□ 0.58
CTSD-203ENST00000429746 APOBEC3GQ9HC16 384 aaKnown RBP18.68■□□□□ 0.58
CTSD-203ENST00000429746 DDX43Q9NXZ2 648 aaKnown RBP18.68■□□□□ 0.58
CTSD-203ENST00000429746 CETN3O15182 167 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 ATP2C2O75185 946 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 MOSPD3O75425 235 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 SOAT2O75908 522 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 HLA-DRAP01903 254 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 ATF6P18850 670 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 CCR2P41597 374 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 SIGLEC14Q08ET2 396 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 WDR72Q3MJ13 1102 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 SLC39A12Q504Y0 691 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 INTS6LQ5JSJ4 861 aaKnown RBP18.67■□□□□ 0.58
CTSD-203ENST00000429746 PRSS36Q5K4E3 855 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 SPOPLQ6IQ16 392 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 KLHL10Q6JEL2 608 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 FAM171BQ6P995 826 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 SEMA4DQ92854 862 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 SLC35C1Q96A29 364 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 GBP4Q96PP9 640 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 SMYD3Q9H7B4 428 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 CRTAC1Q9NQ79 661 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 AVENQ9NQS1 362 aaPredicted RBP18.67■□□□□ 0.58
CTSD-203ENST00000429746 HSFX1Q9UBD0 423 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 CTNND2Q9UQB3 1225 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 SLC27A5Q9Y2P5 690 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 OBSL1O75147 1896 aa18.67■□□□□ 0.58
CTSD-203ENST00000429746 DENND4CQ5VZ89 1909 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 MYBPHLA2RUH7 354 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 FAM163BP0C2L3 166 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 PPP1R2P41236 205 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 ASPAP45381 313 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 EPHA5P54756 1037 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 TWF1Q12792 350 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 BIRC3Q13489 604 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 PTPN21Q16825 1174 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 CBWD6Q4V339 395 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 CBWD3Q5JTY5 395 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 CBWD5Q5RIA9 395 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 METTL23Q86XA0 190 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 TMC8Q8IU68 726 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 ZDHHC14Q8IZN3 488 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 ITFG1Q8TB96 612 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 LPIN3Q9BQK8 851 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 TMEM8AQ9HCN3 771 aa18.66■□□□□ 0.58
CTSD-203ENST00000429746 TMEM221A6NGB7 291 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 M0R296 226 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 PRRG1O14668 218 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 GTF2H1P32780 548 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 LHX1P48742 406 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 CDH8P55286 799 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 STX17P56962 302 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 PAK1Q13153 545 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 ZNF699Q32M78 642 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 HFE2Q6ZVN8 426 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 FILIP1Q7Z7B0 1213 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 THEM5Q8N1Q8 247 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 SYAP1Q96A49 352 aaPredicted RBP18.65■□□□□ 0.58
CTSD-203ENST00000429746 CEP63Q96MT8 703 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 TSG101Q99816 390 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 PI4K2AQ9BTU6 479 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 NUP62CLQ9H1M0 184 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 DPEP3Q9H4B8 488 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 EPS15L1Q9UBC2 864 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 COQ4Q9Y3A0 265 aa18.65■□□□□ 0.58
CTSD-203ENST00000429746 XYLBO75191 536 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 RHOP08100 348 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 HAPLN1P10915 354 aaPredicted RBP18.64■□□□□ 0.57
CTSD-203ENST00000429746 EPB41P11171 864 aaKnown RBP18.64■□□□□ 0.57
CTSD-203ENST00000429746 RAP1GAPP47736 663 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 MARSP56192 900 aaKnown RBP18.64■□□□□ 0.57
CTSD-203ENST00000429746 TRPC3Q13507 836 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 STIM1Q13586 685 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 DPCR1Q3MIW9 517 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 IRF2BP1Q8IU81 584 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms