RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 NQO1P15559 274 aaKnown RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 TCF4P15884 667 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 PECAM1P16284 738 aaPredicted RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 KRT4P19013 534 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 GCKP35557 465 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 MSH2P43246 934 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 CPA2P48052 419 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 ACTR2P61160 394 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 COPS2P61201 443 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 CST9Q5W186 159 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 GPAT2Q6NUI2 795 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 CCDC60Q8IWA6 550 aaPredicted RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 HELQQ8TDG4 1101 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 AGAP11Q8TF27 550 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 MAML1Q92585 1016 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 TRIM11Q96F44 468 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 SERPINB12Q96P63 405 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 MTMR12Q9C0I1 747 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 NOP53Q9NZM5 478 aaKnown RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 MARCOQ9UEW3 520 aaPredicted RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 IVNS1ABPQ9Y6Y0 642 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 LAMB1P07942 1786 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 DKC1O60832 514 aaKnown RBP eCLIP8.49□□□□□ -1.05
HPS4-205ENST00000429411 CBX6O95503 412 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 KRT16P08779 473 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 SFNP31947 248 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 GTF2BQ00403 316 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 EMC2Q15006 297 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 C1QTNF12Q5T7M4 302 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 MIS18BP1Q6P0N0 1132 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 LVRNQ6Q4G3 990 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 C6orf89Q6UWU4 347 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 GLIS1Q8NBF1 620 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 BBOF1Q8ND07 529 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 DTX3LQ8TDB6 740 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 NSUN6Q8TEA1 469 aaKnown RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 ATXN2LQ8WWM7 1075 aaKnown RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 RMDN2Q96LZ7 410 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 RILPQ96NA2 401 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 SLC13A1Q9BZW2 595 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 NGRNQ9NPE2 291 aaKnown RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.49□□□□□ -1.05
HPS4-205ENST00000429411 PPP1R12AO14974 1030 aaPredicted RBP8.48□□□□□ -1.05
HPS4-205ENST00000429411 CST8O60676 142 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 DGAT1O75907 488 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 TROVE2P10155 538 aaKnown RBP eCLIP8.48□□□□□ -1.05
HPS4-205ENST00000429411 DSG3P32926 999 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 RAP1GAPP47736 663 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 NRLP54845 237 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 CUL2Q13617 745 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 PPP6R3Q5H9R7 873 aaPredicted RBP8.48□□□□□ -1.05
HPS4-205ENST00000429411 DARS2Q6PI48 645 aaKnown RBP8.48□□□□□ -1.05
HPS4-205ENST00000429411 C1orf228Q6PIY5 440 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 SLC9A9Q8IVB4 645 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 OR5B17Q8NGF7 314 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 ZNF302Q9NR11 478 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 CYP26B1Q9NR63 512 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 PXMP2Q9NR77 195 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.48□□□□□ -1.05
HPS4-205ENST00000429411 PHTF1Q9UMS5 762 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 SCINQ9Y6U3 715 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 ASAP2O43150 1006 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 RASSF9O75901 435 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 RNF8O76064 485 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 PROSCO94903 275 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 INHBAP08476 426 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 ATP2A2P16615 1042 aaKnown RBP8.48□□□□□ -1.05
HPS4-205ENST00000429411 PSMC1P62191 440 aaKnown RBP8.48□□□□□ -1.05
HPS4-205ENST00000429411 PLCB4Q15147 1175 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 HIF1AQ16665 826 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 MUM1Q2TAK8 710 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 WDR72Q3MJ13 1102 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 C1orf220Q5T0J3 134 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 C3orf62Q6ZUJ4 267 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 C4orf19Q8IY42 314 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 ARL10Q8N8L6 244 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 RNF149Q8NC42 400 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 TMEM35BQ8NCS4 154 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 FEZF2Q8TBJ5 459 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 FAM81BQ96LP2 452 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 ARPC5LQ9BPX5 153 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 SENP7Q9BQF6 1050 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 ROPN1BQ9BZX4 212 aaPredicted RBP8.48□□□□□ -1.05
HPS4-205ENST00000429411 EPB41L4BQ9H329 900 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 ROPN1Q9HAT0 212 aaPredicted RBP8.48□□□□□ -1.05
HPS4-205ENST00000429411 PARVAQ9NVD7 372 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 WHRNQ9P202 907 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 COMMD10Q9Y6G5 202 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 ADGRA3Q8IWK6 1321 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 PDE4DIPQ5VU43 2346 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 WDR46O15213 610 aaKnown RBP8.48□□□□□ -1.05
HPS4-205ENST00000429411 MAPK13O15264 365 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 ZNF862O60290 1169 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 MT-ND3P03897 115 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 CYP1A2P05177 515 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 RAD23BP54727 409 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 MYL6P60660 151 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 STAT4Q14765 748 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 HADHQ16836 314 aaKnown RBP8.48□□□□□ -1.05
HPS4-205ENST00000429411 ZNF699Q32M78 642 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms